Figure 2.
Differentially methylated loci based on the interaction between maternal toenail Hg and urinary As. (A) Volcano plot for the relationship between the multiplicative interaction of log2 toenail Hg and log2 urinary As on DNA methylation at all 348,569 CpGs analyzed. Red and blue lines indicate −log10(1 × 10−4) and −log10(0.05) P-values, respectively. Colors: Yellow = CpG island, Black = CpG Shore, Blue=Shelfs and Open sea. Symbols: Circle = Infinium Type II, Square = Infinium Type I (B) Location of the top 100-CpGs on the basis of P-values compared to all CpGs on the methylation array. Among the top 100 CpGs with lowest P-value, there was a significant enrichment of CpG islands (P = 0.045) and S. Shore regions (P = 0.009).