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. Author manuscript; available in PMC: 2016 Sep 3.
Published in final edited form as: J Phys Chem B. 2015 Aug 14;119(35):11513–11526. doi: 10.1021/acs.jpcb.5b05467

Figure 4.

Figure 4

Potential of Mean Force along the open to closed transition of the HIV RT. Each color represents the PMF with a different substrate bound Correct Nucleotide TTP (Black), Mismatch dATP (Blue), Correct Nucleotide after addition to the growing strand and release of pyrophosphate group (Green), and No nucleotide (Red).