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. 2015 Oct 27;7:112. doi: 10.1186/s13073-015-0226-3

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© Lee et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Outcome summary page for clinical stage in COADREAD (colorectal cancer) is reached by selecting a candidate (gene, miR, or protein). The pie chart displays distribution of samples by subtype for the clinical parameter currently selected. This panel shows a table of clinically relevant genes listed by rank and each associated genomic aberration associated with that gene for the clinical parameter and cancer type. For COADREAD and MSI, the gene MLH1 is top ranked. The color codes of these platforms indicate that MLH1 often shows decreased gene expression (downward blue arrow) and increased methylation (red upward arrow)