Table 2.
Differentially-accumulated proteins in mock-inoculated Nicotiana benthamiana.
| Control (mock-inoculated plants) | |||||
|---|---|---|---|---|---|
| Spot | Mascot hit | T-test | Av ratio* | Curated name | Other GOs |
| PHOTOSYNTHESIS AND CARBOHYDRATE METABOLIC PROCESS | |||||
| 1412 | gi|77745458|gb|ABB02628.1| | 0.0035 | 1.82 | Triosephosphate isomerase | – |
| 810 | gi|445628|prf||1909374A | 0.024 | 1.62 | Rubisco activase | Response to stimulus |
| 1262 | gi|12643758|sp|Q40565.1|RCA2_TOBAC | 0.045 | −1.39 | Rubisco activase | Response to stimulus |
| 963 | gi|362799991|dbj|BAL41455.1| | 0.047 | −1.41 | Fructose 1,6, bisphosphate aldolase | – |
| 1319 | gi|62865755|gb|AAY17070.1| | 0.025 | −1.45 | Carbonic anhydrase | – |
| 768 | gi|159227386|emb|CAJ80484.1| | 0.028 | −1.62 | ATP synthase CF1 beta subunit | – |
| 1302 | gi|3914940|sp|O20252.1|S17P_SPIOL | 0.045 | −1.94 | Sedoheptulose-1,7-bisphosphatase, chloroplastic | – |
| 1896 | gi|190146228|gb|FG644758.1|FG644758 | 0.0077 | −2 | Photosystem II reaction center PSB28 protein | – |
| 1295 | gi|62865755|gb|AAY17070.1| | 0.038 | −7.27 | Carbonic anhydrase | – |
| CELLULAR AMINO ACID METABOLIC PROCESS | |||||
| 770 | gi|12643806|sp|Q9LEC8.1|DHEB_NICPL | 0.014 | −1.63 | Glutamate dehydrogenase | Response to stimulus |
| PROTEIN METABOLIC PROCESS | |||||
| 1540 | gi|357480975|ref|XP_003610773.1| | 0.029 | 2.83 | Proteasome subunit beta type-2-A-like | – |
| 1407 | gi|14594931|emb|CAC43326.1| | 0.044 | 2.46 | Proteasome subunit beta type-5-like | – |
| 1741 | gi|460407957|ref|XP_004249415.1| | 0.048 | 1.86 | Ubiquitin-conjugating enzyme E2 variant 1D | Response to stimulus |
| 1814 | gi|508712318|gb|EOY04215.1| | 0.0089 | 1.66 | Ribosomal protein PSRP3/Ycf65 | – |
| 678 | gi|39857235|gb|CK284052.1|CK284052 | 0.0034 | 1.52 | Peptidase m20 m25 m40 family protein | – |
| RESPONSE TO STIMULUS | |||||
| 1555 | gi|134642|sp|P22302.1|SODF_NICPL | 0.026 | 2.99 | Superoxide dismutase [Fe] | – |
| 1059 | gi|460385950|ref|XP_004238663.1| | 0.0024 | 1.97 | Quinone oxidoreductase-like protein | Photosynthesis |
| 1601 | gi|543176812|gb|AGV54429.1| | 0.014 | 1.8 | Peroxiredoxin | Photosynthesis |
| 1194 | gi|460397188|ref|XP_004244150.1| | 0.035 | −1.48 | Thiamine thiazole synthase 1, chloroplastic-like | – |
| TRANSPORT | |||||
| 405 | gi|350537279|ref|NP_001234287.1| | 0.015 | −1.69 | Vacuolar H+-ATPase A2 subunit | – |
| 406 | gi|350537279|ref|NP_001234287.1| | 0.014 | −1.8 | Vacuolar H+-ATPase A2 subunit | – |
| 408 | gi|350537279|ref|NP_001234287.1| | 0.013 | −1.86 | Vacuolar H+-ATPase A2 subunit | – |
| NO ANNOTATION AVAILABLE | |||||
| 1101 | gi|52580767|gb|CV292958.1|CV292958 | 0.031 | 2.12 | Oxidoreductase, zinc binding dehydrogenase family protein | – |
Av. ratio = the average ratio derived from four measurements. Av. ratio cells are colored according to the value (red represents highest, green lowest and yellow intermediate ratios). T-test column is colored according to p-values (lowest values are green, higher ones are paler).