Table 4. Distribution of tetra, penta and hexapolymer single sequence repeats (SSRs) in the Dianthus chloroplast genome.
| SSR type | SSR sequence | SSR size (bp) | Start | End | Location |
|---|---|---|---|---|---|
| tetra | (AAAG)3 | 12 | 57620 | 57631 | accD (CDS) |
| tetra | (AAAT)3 | 12 | 45281 | 45292 | rps4/trnT-UGU (IGS) |
| tetra | (AAAT)3 | 12 | 68400 | 68411 | rpl20/rps12 (IGS) |
| tetra | (AAAG)3 | 12 | 73744 | 73755 | psbH/petB (IGS) |
| tetra | (AAAT)3 | 12 | 45232 | 45243 | rps4/trnT-UGU (IGS) |
| tetra | (AAGG)3 | 12 | 130143 | 130154 | atpF/atpH (IGS) |
| tetra | (AATC)3 | 12 | 114993 | 115004 | ndhE (CDS) |
| tetra | (AAAC)3 | 12 | 45317 | 45328 | rps4/trnT-UGU (IGS) |
| tetra | (ACCT)3 | 12 | 102711 | 102722 | rrn23 (CDS) |
| tetra | (AATT)3 | 12 | 47846 | 47857 | trnF-GAA/ndhJ (IGS) |
| tetra | (AAAT)4 | 16 | 45916 | 45931 | trnT-UGU/trnL-UAA (IGS) |
| penta | (AATAC)3 | 15 | 45410 | 45424 | rps4/trnT-UGU (IGS) |
| hexa | (AATGGG)3 | 18 | 77126 | 77143 | rpoA (CDS) |