Table 5. Distribution of tandem repeats in the Dianthus chloroplast genome.
S.No. | Repeat length (bp) | Consensus size × copy number | Start | End | Location |
---|---|---|---|---|---|
1 | 24 | 12×2 | 29889 | 29912 | trnE-UUC/trnT-GGU (IGS) |
2 | 24 | 12×2 | 30419 | 30430 | trnE-UUC/trnT-GGU (IGS) |
3 | 20 | 10×2 | 30672 | 30691 | trnT-GGU/psbD (IGS) |
4 | 22 | 11×2 | 41328 | 41349 | psaA/ycf3 (IGS) |
5 | 22 | 11×2 | 45225 | 45246 | rps4/trnT-UGU (IGS) |
6 | 20 | 10×2 | 45631 | 45650 | rps4/trnT-UGU (IGS) |
7 | 20 | 10×2 | 45648 | 45667 | rps4/trnT-UGU (IGS) |
8 | 30 | 15×2 | 46377 | 46406 | trnT-UGU/trnL-UAA (IGS) |
9 | 22 | 11×2 | 46866 | 46887 | trnL-UAA (Intron) |
10 | 20 | 10×2 | 53295 | 53314 | atpB-rbcL (IGS) |
11 | 20 | 10×2 | 55592 | 55611 | rbcL-accD (IGS) |
12 | 20 | 10×2 | 55607 | 55627 | rbcL-accD (IGS) |
13 | 24 | 12×2 | 65797 | 65820 | trnP-UGG/psaJ (IGS) |
14 | 38 | 19×2 | 71150 | 71187 | clpP/psbB (IGS) |
15 | 44 | 22×2 | 80513 | 80556 | rpl16 (Intron) |
16 | 20 | 10×2 | 82636 | 82655 | rpl22/rps19 (IGS) |
17 | 20 | 10×2 | 110817 | 110836 | rpl32/trnL-UAG (IGS) |
18 | 46 | 23×2 | 111417 | 111462 | trnL-UAG/ccsA (IGS) |
19 | 22 | 11×2 | 118342 | 118342 | ndhA (Intron) |