Table 1.
Site of | Phylogenetic | Virulence factorsb: | ||||
---|---|---|---|---|---|---|
Isolatea | infection | group | MLST | Serotype | fimH, papC, papGII, papGIII, sfa/foc, hra, tsh, iucC, hlyA, traT, sat, cnf1, usp, cdt, vat, ibeA, ompT, neuB, csgA and pgaA | Reference |
Ec1 | Knee | B2 | ST95 | O2 | fimH, papC, papGII, iucC, traT, usp, vat, ompT, neuB, csgA and pgaA | This study |
Ec2 | Knee | B2 | ST80 | O75 | fimH, sfa/foc, hra, hlyA, cnf1, usp, vat, ibeA, ompT, neuB, csgA and pgaA | This study |
Ec3 | Hip | B2 | ST537 | O75 | fimH, papC, papGIII, sfa/foc, hra, hlyA, cnf1, usp, cdt, vat, ibeA, ompT, csgA and pgaA | This study |
Ec4 | Knee | B2 | ST126 | - | fimH, papC, papGIII, sfa/foc, hra, hlyA, cnf1, usp, cdt, vat, ibeA, ompT, csgA and pgaA | This study |
Ec5 | Hip | B2 | ST141 | O2 | fimH, papC, papGIII, sfa/foc, hra, hlyA, cnf1, usp, vat, ompT, neuB, csgA and pgaA | This study |
Ec6 | Hip | B2 | ST404 | O75 | fimH, papGII, iucC, sat, usp, vat, ompT, csgA and pgaA | This study |
Ec7 | Hip | B2 | ST73 | - | fimH, sfa/foc, hra, hlyA, cnf1, usp, vat, ompT, csgA and pgaA | This study |
Ec8 | Hip | B2 | ST73 | O6 | fimH, papC, papGII, sfa/foc, iucC, hlyA, sat, usp, vat, ompT, csgA and pgaA | This study |
Ec9 | Hip | B2 | ST550 | O75 | fimH, sfa/foc, iucC, sat, usp, vat, ompT, csgA and pgaA | This study |
Ec10 | Hip | B2 | ST95 | O1 | fimH, papC, papGII, iucC, traT, usp, vat, ompT, neuB, csgA and pgaA | This study |
Ec11 | Knee | B2 | ST141 | O2 | fimH, papC, papGIII, sfa/foc, hra, hlyA, cnf1, usp, vat, ompT, neuB, csgA and pgaA | This study |
Ec12 | Hip | B2 | ST1618 | O4 | fimH, sfa/foc, usp, cdt, vat, ompT, csgA and pgaA | This study |
Ec13 | Hip | B2 | ST95 | O1 | fimH, papC, papGII, iucC, traT, usp, vat, ompT, neuB, csgA and pgaA | This study |
Ec14 | Hip | D | ST354 | O1 | fimH, iucC, traT, usp, ibeA and csgA | This study |
Ec15 | Knee | D | ST405 | O2 | fimH, papC, hra, iucC, hlyA, traT, sat, ompT, csgA and pgaA | This study |
Ec16 | Hip | D | ST420 | – | fimH, usp, vat, ibeA, ompT, neuB, csgA and pgaA | This study |
Ec17 | Hip | A | ST361 | – | fimH, traT, csgA and pgaA | This study |
Ec18 | Knee | A | ST88 | O8 | fimH, papC, hra, iucC, csgA and pgaA | This study |
Ec19 | Hip | A | ST10 | – | fimH, papC, hra, iucC, traT, ompT, csgA and pgaA | This study |
Ec20 | Hip | B1 | ST1167 | O21 | fimH, iucC, ompT, csgA and pgaA | This study |
ZKLR± | – | B2 | – | O83 | fimH, papC, papGII, papGIII, sfa/foc, hra, tsh, hlyA, cnf1, usp, vat, ibeA, ompT, csgA and pgaA | (Sheshko et al. 2006) |
Zhly_ | – | B2 | – | O83 | fimH, papC, papGII, papGIII, sfa/foc, hra, tsh, cnf1, usp, vat, ibeA, ompT, csgA and pgaA | (Sheshko et al. 2006) |
aE. coli strains that induced osteoblasts lysis in vitro are underlined.
bVirulence factors significantly associated with the osteoblasts lysis potential are shown in bold type.