Table 1.
Unique in silico Restriction Endonuclease digestion pattern (5′–3′) of fadJ gene of Yersinia genomes
| Genome | fadJ gene digestion with restriction endonucleases | |||
|---|---|---|---|---|
| HpyCH4V | BfuCI | CviAII | AluI | |
| AM286415 | 48·294·448·464·52·24·469·301 | 839·531·13·717 | 135·149·1019·797 | 16·763·1321 |
| CP007230 | 52·179·294·912·608·181·117 | 210·56·54·556·353·337·569·208 | 318·109·313·746·257·306·294 | 37·69·350·358·113·691·565·156·4 |
| CP007448 | 163·15·8·439·303·464·545·295 | 831·926·475 | 273·149·133·886·500·126·165 | 154·329·388·492·117·447·54·94·157 |
| CP009367 | 186·294·448·464·52·24·469·301 | 38·939·531·13·717 | 422·1019·797 | – |
| CP009539 | 168·294·603·227·82·343·357·131 | 92·234·487·452·238·80·381·88·153 | 112·143·154·1014·782 | 393·10·1298·184·320 |
| CP009781 | 186·27·267·313·507·92·343·210·290 | 275·556·257·433·236·478 | 273·562·606·518·276 | 483·376·660·219·240·221·36 |
| CP009787 | 186·294·484·315·165·111·180·183·19·304 | 110·721·690·720 | 67·20·186·25·84·506·553·500·126·96·78 | 199·666·52·683·360·277·4 |
| CP009801 | 163·23·27·267·139·345·428·52·768·23 | 530·27·18·256·48·185·457·131·583 | 273·109·506·261·292·500·222·72 | 917·323·240·93·662 |
| CP011078 | 168·294·830·82·831 | 92·234·487·452·238·80·381·88·60·93 | 112·143·109·45·792·222·782 | 393·1308·184·320 |
| HF571988 | 186·294·559·353·52·24·469·80·221 | 977·544·104·613 | 273·149·1019·797 | 52·102·711·6·11·35·167·1154 |
| FR729477 | 480·912·52·24·22·447·80·221 | – | – | – |
(·): RE site in the gene sequence; (–): no digestion observed