Table 1.
Provenance of samples
| Species | Type of DNA | Age | Reference | Study ID | Sample/run ID |
|---|---|---|---|---|---|
| Metagenomics sample | Sedimentary | 8030-7908* | Smith et al., 2015 | PRJEB6766‡ | ERR567364‡ |
| Metagenomics sample | Sedimentary | 8030-7908* | Smith et al., 2015 | PRJEB6766‡ | ERR567365‡ |
| Metagenomics sample | Sedimentary | 8030-7908* | Smith et al., 2015 | PRJEB6766‡ | ERR567366‡ |
| Metagenomics sample | Sedimentary | 8030-7908* | Smith et al., 2015 | PRJEB6766‡ | ERR567367‡ |
| Metagenomics sample | Sedimentary | 8030-7908* | Smith et al., 2015 | PRJEB6766‡ | ERR732642‡ |
| T. aestivum | Modern | NA | Chapman et al., 2015 | PRJNA250383‡ | SRR1170664‡ |
| S. tuberosum | Ancient | 135† | Yoshida et al., 2013 | PRJEB1877‡ | ERR267886‡ |
| S. tuberosum | Ancient | 137† | Yoshida et al., 2013 | PRJEB1877‡ | ERR267882‡ |
| S. tuberosum | Ancient | 149† | Yoshida et al., 2013 | PRJEB1877‡ | ERR330058‡ |
| S. tuberosum | Ancient | 165† | Yoshida et al., 2013 | PRJEB1877‡ | ERR267872‡ |
| S. tuberosum | Ancient | 166† | Yoshida et al., 2013 | PRJEB1877‡ | ERR267868‡ |
| S. tuberosum | Ancient | 166† | Yoshida et al., 2013 | PRJEB1877‡ | ERR957324‡ |
| S. tuberosum | Ancient | 167† | Yoshida et al., 2013 | PRJEB1877‡ | ERR267868‡ |
| S. lycopersicum | Ancient | 136† | Yoshida et al., 2013 | PRJEB1877‡ | ERR267884‡ |
| S. lycopersicum | Ancient | 139† | Yoshida et al., 2013 | PRJEB1877‡ | ERR267878‡ |
| G. gorilla | Ancient | 83† | Sawyer et al., 2012 | NA | 107¶ |
| G. gorilla | Ancient | 100† | Sawyer et al., 2012 | NA | 109¶ |
| G. gorilla | Ancient | 100† | Sawyer et al., 2012 | NA | 110¶ |
| G. gorilla | Ancient | 103† | Sawyer et al., 2012 | NA | 114¶ |
| Homo sapiens | Ancient | 7000* | Olalde et al., 2014 | PRJNA230689‡ | SRR1045127 |
B.P. (before present years).
Calculated from collection date (in years).
IDs from the European Nucleotide Archive.
IDs from Sawyer et al., 2012.