Table 1.
Summary of HLA class I alleles and number of identified MV peptides and source proteins per BLCL.
Cell line | HLA-A | HLA-B | HLA-C | MV peptides | MV proteins represented |
---|---|---|---|---|---|
BLCL1053 | A*02:01 | B*07:02 | C*07:02 | 27a (13, 7, 2, 5)b | 7 |
A*03:01 | B*07:02 | C*07:02 | |||
BLCL1077 | A*01:01 | B*08:01 | C*03:04 | 12 (0, 12, 0, 0) | 5 |
A*24:02 | B*40:01 | C*07:01 | |||
BLCL1090 | A*02:01 | B*35:01 | C*04:01 | 22 (10, 10, 0, 2) | 7 |
A*11:01 | B*44:02 | C*05:01 | |||
BLCL1112 | A*02:01 | B*15:01 | C*03:04 | 28 (7, 11, 1, 9) | 7 |
A*02:01 | B*44:02 | C*05:01 | |||
Total | 89c,d (30, 40, 3, 16) | 8 | |||
Total unique | 5 | 6 | 5 | 70e (18, 38, 3, 11) |
aNumber of unique HLApMV combinations identified per cell line.
bBetween brackets the number of assignments to HLA-A, -B, -C, and NA, respectively.
cTotal number of HLApMV combinations identified in this study.
dA cumulative list of all identified HLApMV combinations with detailed information on source sample, allele assignment, and expression rate is given in Table S2 in Supplementary Material.
eUnique HLApMV combinations are short-listed in Table 2.