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. Author manuscript; available in PMC: 2016 Feb 17.
Published in final edited form as: Biochemistry. 2015 Feb 3;54(6):1364–1370. doi: 10.1021/bi5014722

Table 2.

The pKa of all oligos in 30 mM sodium cacodylate ± 40% PEG-300. The ΔpKa are also shown to emphasize the difference upon adding 40% PEG-300.

pKa No PEG pKa 40% PEG ΔpKa
T1 6.67 ± 0.01 7.03 ± 0.05 0.36
Mod1T3 6.66 ± 0.01 7.04 ± 0.05 0.38
Mod1T5 6.25 ± 0.04 6.71 ± 0.12 0.46
Mod1T10 6.14 ± 0.02 6.54 ± 0.05 0.40
Mod1T15 nd.* nd.* nd.*
Mod1T20 nd.* nd.* nd.*
Mod2T3 6.66 ± 0.03 7.16 ± 0.05 0.50
Mod2T5 6.68 ± 0.04 7.14 ± 0.05 0.46
Mod2T10 6.62 ± 0.02 6.98 ± 0.07 0.36
Mod2T15 6.33 ± 0.02 6.71 ± 0.06 0.38
Mod2T20 5.98 ± 0.05 6.48 ± 0.06 0.50
Mod3T3 6.70 ± 0.03 7.00 ± 0.06 0.30
Mod3T5 6.27 ± 0.02 6.63 ± 0.08 0.36
Mod3T10 6.12 ± 0.02 6.42 ± 0.05 0.30
Mod3T15 nd.* nd.* nd.*
Mod3T20 nd.* nd.* nd.*
*

Tm of oligo ≤ 20 °C, thus pKa not determined at 20 °C.