Table 1.
POP | N | COI | trnW-L | COI + trnW-L | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S | Pi | Hd | h | S | Pi | Hd | h | S | Pi | Hd | h | ||
Japan | 231 | 19 | 0.00067 | 0.47149 | 15 | 16 | 0.00131 | 0.39029 | 16 | 35 | 0.00079 | 0.72528 | 30 |
1 | 27 | 5 | 0.00041 | 0.44160 | 5 | 3 | 0.00113 | 0.33333 | 4 | 8 | 0.00055 | 0.50427 | 7 |
2 | 6 | 1 | 0.00035 | 0.53333 | 2 | 0 | 0.00000 | 0.00000 | 1 | 1 | 0.00028 | 0.53333 | 2 |
3 | 22 | 0 | 0.00000 | 0.00000 | 1 | 2 | 0.00050 | 0.17749 | 3 | 2 | 0.00010 | 0.17749 | 3 |
4 | 10 | 2 | 0.00047 | 0.35556 | 2 | 2 | 0.00110 | 0.37778 | 3 | 4 | 0.00059 | 0.64444 | 4 |
5 | 24 | 2 | 0.00056 | 0.43116 | 2 | 1 | 0.00023 | 0.08333 | 2 | 3 | 0.00050 | 0.48913 | 3 |
6 | 21 | 1 | 0.00006 | 0.09524 | 2 | 1 | 0.00071 | 0.25714 | 2 | 2 | 0.00019 | 0.33810 | 3 |
7 | 28 | 8 | 0.00191 | 0.68254 | 5 | 1 | 0.00039 | 0.14021 | 3 | 10 | 0.00162 | 0.74339 | 7 |
8 | 26 | 2 | 0.00026 | 0.38462 | 3 | 1 | 0.00021 | 0.07692 | 2 | 3 | 0.00025 | 0.39692 | 4 |
9 | 7 | 0 | 0.00000 | 0.00000 | 1 | 3 | 0.00421 | 0.76190 | 3 | 3 | 0.00081 | 0.76190 | 3 |
10 | 28 | 0 | 0.00000 | 0.00000 | 1 | 1 | 0.00140 | 0.50794 | 2 | 1 | 0.00027 | 0.50794 | 2 |
11 | 32 | 1 | 0.00021 | 0.31452 | 2 | 1 | 0.00134 | 0.48387 | 2 | 2 | 0.00042 | 0.55645 | 3 |
Russia | 267 | 16 | 0.00009 | 0.10935 | 14 | 9 | 0.00159 | 0.52984 | 9 | 25 | 0.00038 | 0.58537 | 22 |
12 | 28 | 1 | 0.00005 | 0.07143 | 2 | 2 | 0.00039 | 0.14021 | 3 | 3 | 0.00011 | 0.20635 | 4 |
13 | 24 | 2 | 0.00011 | 0.16304 | 3 | 1 | 0.00023 | 0.08333 | 2 | 3 | 0.00013 | 0.23913 | 4 |
14 | 29 | 2 | 0.00013 | 0.19704 | 3 | 0 | 0.00000 | 0.00000 | 1 | 2 | 0.00011 | 0.19704 | 3 |
15 | 28 | 2 | 0.00009 | 0.14021 | 3 | 2 | 0.00090 | 0.31481 | 3 | 4 | 0.00025 | 0.38095 | 5 |
16 | 21 | 2 | 0.00012 | 0.18571 | 3 | 1 | 0.00026 | 0.09524 | 2 | 3 | 0.00015 | 0.27143 | 4 |
17 | 30 | 1 | 0.00004 | 0.06667 | 2 | 3 | 0.00139 | 0.38391 | 3 | 4 | 0.00030 | 0.39540 | 4 |
18 | 16 | 1 | 0.00008 | 0.12500 | 2 | 1 | 0.00035 | 0.12500 | 2 | 2 | 0.00013 | 0.24167 | 3 |
19 | 26 | 1 | 0.00005 | 0.07692 | 2 | 2 | 0.00042 | 0.07692 | 2 | 3 | 0.00012 | 0.15077 | 3 |
20 | 29 | 5 | 0.00023 | 0.13547 | 3 | 0 | 0.00000 | 0.00000 | 1 | 5 | 0.00018 | 0.13547 | 3 |
21 | 30 | 0 | 0.00000 | 0.00000 | 1 | 0 | 0.00000 | 0.00000 | 1 | 0 | 0.00000 | 0.00000 | 1 |
22 | 6 | 0 | 0.00000 | 0.00000 | 1 | 2 | 0.00331 | 0.60000 | 2 | 2 | 0.00063 | 0.60000 | 2 |
Korea | 27 | 5 | 0.00033 | 0.33333 | 4 | 0 | 0.00000 | 0.00000 | 1 | 5 | 0.00027 | 0.03333 | 4 |
23 | 27 | 5 | 0.00033 | 0.33333 | 4 | 0 | 0.00000 | 0.00000 | 1 | 5 | 0.00027 | 0.03333 | 4 |
China | 87 | 1 | 0.00028 | 0.43304 | 2 | 3 | 0.00146 | 0.49051 | 3 | 4 | 0.00051 | 0.55306 | 5 |
24 | 27 | 0 | 0.00000 | 0.00000 | 1 | 0 | 0.00000 | 0.00000 | 1 | 0 | 0.00000 | 0.00000 | 1 |
25 | 30 | 0 | 0.00000 | 0.00000 | 1 | 3 | 0.00149 | 0.42069 | 3 | 3 | 0.00028 | 0.42069 | 3 |
26 | 30 | 1 | 0.00012 | 0.18621 | 2 | 1 | 0.00066 | 0.23908 | 2 | 2 | 0.00023 | 0.24598 | 3 |
Total | 612 | 35 | 0.00043 | 0.40824 | 30 | 20 | 0.00191 | 0.56200 | 22 | 55 | 0.00072 | 0.72165 | 53 |
N number of sequences, S number of segregating sites, Pi nucleotide diversity, Hd haplotype diversity, h number of haplotypes in each population. The bold indicated that the summary genetic diversity of all populations in this regions