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. 2015 Nov 2;16:65. doi: 10.1186/s12865-015-0127-7

Table 1.

HLA class I restricted epitopes (I)

Number Residues Sequence HLA Reference
HBsEC-1 20–28 FLLTRILTI A*02:01, 02:05, 02:06 [13]
HBsEC-2 88–96 LLCLIFLLV A2 [9, 14]
HBsEC-3 95–104 LVLLDYQGML A2 [8]
HBsEC-4 172–180 WLSLLVPFV A*02:01, 02:02,02:03,02:05, 02:06 [6, 8, 9, 14, 15]
HBsEC-5 207–216 SIVSPFIPLL A2 [14]
HBsCP-6b 169–176 FLGPLLVL A2a
180–187
179–188
HBsCP-7b 72–79 LLGWSPQA A2a
61–68
71–78
HBsCP-8b 259–266 LLLCLIFL A2a
248–255
258–265
HBsCP-9b 333–370 FLWEWASA A2a
332–339
322–329
HBsCP-10b 129–136 PAGGSSSG A2a
140–147
139–146
HBcEC-11 18–27 FLPSDFFPSV A*02:01, 02:05, 02:06 [6, 8, 9, 1417]
HBcEC-12 88–96 YVNVNMGLK A11 [18]
HBcEC-13 107–115 CLTFGRETV A2 [8]
HBcEC-14 117–125 EYLVSFGVW A24 [19]
HBcEC-15 139–148 ILSTLPETTV A2 [8]
HBcCP-16 141–148 TLPETTVV A2
HBcCP-17 160–168 PSPRRRRS A2
HBcCP-18 64–71 LMTLATWV A2
HBcCP-19 29–36 LLDTASAL A2
HBcCP-20 107–114 LTFGRETV A2

Name and amino acid position of the 20 epitopes. HLA genotype indicates which genotypes were tested in previous studies (HBsEC1-5 and HBcEC11-15), or which genotypes we stratified for in the in silico analysis (HBsCP6-10 and HBcCP16-20)

HBsEC HBsAg experimentally confirmed, HBsCP HBsAg computer predicted, HBcEC HBcAg experimentally confirmed, HBcCP HBcAg computer predicted

aall subtypes

bdifferences of sequence position among HBV genotypes was observed for in silico prediction of HBsAg