Table 5.

Bi-variate analyses using G _D (i.e. the GRM built with the SNPs with effects in different directions in both breeds)

Phenotype	BB			TC			r G
	$h_P^2$	$h_G^2$	C miss	$h_P^2$	$h_G^2$	C miss
Navel score	0.10	0.85	0.11	0.07	0.89	0.08	−0.91
Coat score	0.12	0.83	0.13	0.11	0.83	0.12	−0.89
Coat colour	0.08	0.87	0.08	0.06	0.91	0.06	−0.93
Body condition	0.08	0.88	0.08	0.10	0.84	0.10	−0.95
Yearling weight	0.07	0.90	0.07	0.08	0.88	0.08	−0.95

Proportion of variance explained by either pedigree-based ($h_P^2$) or genomic-based ($h_G^2$) genetic variance, proportion of missing heritability (Cmiss) and estimate of genomic correlation (rG) between Brahman (BB) and Tropical Composite (TC) cows for the five phenotypes