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. 2015 May;96(Pt 5):1033–1041. doi: 10.1099/vir.0.000051

Table 1. List of capsid amino acid residues and their scores from entropy and ConSurf analysis.

Amino acids are arranged according to their order in the P1 sequence. The predicted amino acid residues are mostly located close to known epitopes except for residue VP2-191 that is 5 aa apart from VP2-196. nr, No reference antigenic site reported; GHL, VP1 G-H loop.

P1 position Viral protein (VP) VP position Entropy value ConSurf score Epitope reported previously Residue located on external surface
159 2 74 1.1 3.985 nr Yes
163 2 78 1.156 4.458 nr Yes
171 2 86 1.183 4.472 nr Yes
173 2 88 0.867 3.644 nr Yes
218 2 133 1.37 4.662 nr Yes
219 2 134 1.704 4.802 134 Yes
276 2 191* 1.627 4.789 nr Yes
292 2 207 1.018 3.65 nr No
338 3 35 0.988 3.523 nr No
373 3 70 1.031 4.541 70 Yes
374 3 71 1.348 5.29 71 Yes
434 3 131* 0.931 3.074 nr Yes
523 3 220* 1.25 5.034 nr Yes
566 1 42 1.096 2.529 nr Yes
567 1 43* 1.222 2.996 nr Yes
568 1 44* 1.42 3.555 nr Yes
569 1 45* 1.554 3.861 nr Yes
623 1 99 1.585 4.287 nr Yes
625 1 101 1.078 2.38 nr Yes
663 1 139 1.177 2.855 139 GHL
666 1 142 1.185 2.915 142 GHL
673 1 149 1.263 3.132 149 GHL
721 1 197 1.484 3.783 nr Yes
722 1 198 1.343 3.3 198 Yes
*

Residues selected for site-directed mutagenesis study.