Table 1. List of capsid amino acid residues and their scores from entropy and ConSurf analysis.
P1 position | Viral protein (VP) | VP position | Entropy value | ConSurf score | Epitope reported previously | Residue located on external surface |
159 | 2 | 74 | 1.1 | 3.985 | nr | Yes |
163 | 2 | 78 | 1.156 | 4.458 | nr | Yes |
171 | 2 | 86 | 1.183 | 4.472 | nr | Yes |
173 | 2 | 88 | 0.867 | 3.644 | nr | Yes |
218 | 2 | 133 | 1.37 | 4.662 | nr | Yes |
219 | 2 | 134 | 1.704 | 4.802 | 134 | Yes |
276 | 2 | 191* | 1.627 | 4.789 | nr | Yes |
292 | 2 | 207 | 1.018 | 3.65 | nr | No |
338 | 3 | 35 | 0.988 | 3.523 | nr | No |
373 | 3 | 70 | 1.031 | 4.541 | 70 | Yes |
374 | 3 | 71 | 1.348 | 5.29 | 71 | Yes |
434 | 3 | 131* | 0.931 | 3.074 | nr | Yes |
523 | 3 | 220* | 1.25 | 5.034 | nr | Yes |
566 | 1 | 42 | 1.096 | 2.529 | nr | Yes |
567 | 1 | 43* | 1.222 | 2.996 | nr | Yes |
568 | 1 | 44* | 1.42 | 3.555 | nr | Yes |
569 | 1 | 45* | 1.554 | 3.861 | nr | Yes |
623 | 1 | 99 | 1.585 | 4.287 | nr | Yes |
625 | 1 | 101 | 1.078 | 2.38 | nr | Yes |
663 | 1 | 139 | 1.177 | 2.855 | 139 | GHL |
666 | 1 | 142 | 1.185 | 2.915 | 142 | GHL |
673 | 1 | 149 | 1.263 | 3.132 | 149 | GHL |
721 | 1 | 197 | 1.484 | 3.783 | nr | Yes |
722 | 1 | 198 | 1.343 | 3.3 | 198 | Yes |
Residues selected for site-directed mutagenesis study.