Table II. New periplasmic conserved proteins, unique periplasmic proteins, and periplasmic proteins not previously annotated in the genome of A. ferrooxidans ATCC 23270.
Conditions and sequence analysis were the same as in Table I.
| AFE | Function/similarity | Score | E value | Molecular weight/pI | Export signal | No. unique peptides | Sequence coverage |
|---|---|---|---|---|---|---|---|
|
| |||||||
| % | |||||||
| Hypothetical proteins | |||||||
| 136 | Conserved hypothetical protein | 63.2/9.78 | Sec | 4 | 8 | ||
| 163 | Conserved hypothetical protein | 59.6/9.4 | Sec | 3 | 7 | ||
| 278 | Conserved hypothetical protein | 23.9/9.04 | Sec | 1 | 4 | ||
| 981 | Conserved hypothetical protein | 24.2/8.92 | Sec | 6 | 29 | ||
| 2570 | Conserved hypothetical protein | 27.4/9.98 | SecP | 2 | 11 | ||
| 2954 | Conserved hypothetical protein | 28.9/8.91 | Sec | 3 | 14 | ||
| 3181 | Conserved hypothetical protein | 19.9/8.54 | Sec | 6 | 42 | ||
| 1060 | Conserved domain protein | 39.3/7.29 | Sec | 12 | 47 | ||
| 1061 | Conserved domain protein | 10.8/5.66 | Sec | 7 | 63 | ||
| 2507 | Conserved domain protein | 28/8.04 | SecP | 1 | 4 | ||
| 2910 | Conserved domain protein | 52.2/9.31 | Sec | 2 | 6 | ||
| 157 | Hypothetical protein | 31.3/10.79 | Sec | 3 | 11 | ||
| 292 | Hypothetical protein | 15.5/9.3 | Sec | 8 | 54 | ||
| 457 | Hypothetical protein | 15.4/9.74 | Sec | 6 | 52 | ||
| 610 | Hypothetical protein | 10.9/12.24 | Sec | 3 | 31 | ||
| 826 | Hypothetical protein | 17.8/9.72 | Sec | 3 | 25 | ||
| 1110 | Hypothetical protein | 16.1/10 | Sec | 4 | 20 | ||
| 2111 | Hypothetical protein | 21.4/9.94 | Sec | 4 | 25 | ||
| 2167 | Hypothetical protein | 25.4/9.88 | SecP | 3 | 15 | ||
| 2418 | Hypothetical protein | 27.9/9.55 | Sec | 1 | 4 | ||
| 2429 | Hypothetical protein | 46.3/9.04 | Sec | 7 | 21 | ||
| 2434 | Hypothetical protein | 44.5/8.78 | Sec | 2 | 7 | ||
| 2770 | Hypothetical protein | 19.9/5.04 | Sec | 2 | 14 | ||
| 2928 | Hypothetical protein | 14.8/7.8 | Sec | 3 | 32 | ||
| 2994 | Hypothetical protein | 49.8/9.1 | Sec | 13 | 44 | ||
| 3060 | Hypothetical protein | 20.3/10.14 | Sec | 3 | 25 | ||
| 3099 | Hypothetical protein | 21.3/8.56 | Sec | 3 | 18 | ||
| 3197 | Hypothetical protein | 14.5/9.48 | Sec | 8 | 50 | ||
| ORFs not annotated by TIGR | |||||||
| Copper resistance protein CopC (Burkholderia sp. 383) | 85.9 | 4e–16 | 13.5/10.17 | Sec | 4 | 45 | |
| Putative sterol carrier protein (T. denitrificans ATCC 25259) | 120 | 3e–26 | 20.5/9.4 | Sec | 1 | 10 | |
| Cytochrome c, class I (Anaeromyxobacter dehalogenans 2CP-C) | 74.3 | 5e–12 | 32.2/9.99 | SecP | 12 | 31 | |
| Hypothetical protein | 15.4/7.25 | Sec | 3 | 33 | |||
| Hypothetical protein | 10.4/9.43 | Sec | 1 | 11 | |||
| Hypothetical protein | 15.3/10.28 | Sec | 4 | 30 | |||
| Hypothetical protein | 16.8/9.33 | Sec | 9 | 69 | |||