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. 2015 Nov 4;10(11):e0141475. doi: 10.1371/journal.pone.0141475

Table 1. Primer sequences used for Reverse Transcriptase—Polymerase Chain Reaction and sequencing of partial segment S1 of piscine reovirus.

Ta is the annealing temperature used for each set of primers.

Name Sequences Positions Direction Ta (°C) Source
PRV-S1-F1 GATAAAGACTTCTGTACGTGAAAC 1–24 Forward 54 Kibenge et al [10]
PRV-S1-R1 GATGAATAAGACCTCCTTCC 1,062–1,081 Reverse 54 Kibenge et al [10]
S1PRV14F GTACGTGAAACCCAAATGGCG 14–34 Forward 62 This study
S1PRV295R CCAATCTCCGGGTGCAGAAT 276–295 Reverse 62 This study
S1PRV800F CGAAGGATGTGCTATTCAGGC 800–820 Forward 62 This study
S1PRV1070R CCTCCTTCCCCCTCAGAC 1,053–1,070 Reverse 62 This study
S1PRV287F1 GGAGATTGGACATGGAGTG 287–305 Forward 54 This study
S1PRV542R1 GATTTCAACTCGTCAGGG 535–552 Reverse 54 This study
S1PRV273F2 ATCATTCTGCACCCGGAG 273–290 Forward 54 This study
S1PRV569R2 TTGAATAGTCAGGGAAAGA 551–569 Reverse 54 This study
S1PRV541F CGAGTTGAAATCTTTCCCTG 541–560 Forward 54 This study
S1PRV838R GATGATGTTGGCTGGCATGCC 818–838 Reverse 54 This study
S1PRV541F CGAGTTGAAATCTTTCCCTG 541–560 Forward 62 This study
S1PRV840R TTGATGATGTTGGCTGGC 823–840 Reverse 62 This study
S1PRV270F GGGATCATTCTGCACCCGG 270–288 Forward 54 This study
S1PRV562R GTCAGGGAAAGATTTCAACTCG 541–562 Reverse 54 This study
S1PRV287F1 GGAGATTGGACATGGAGTG 287–305 Forward 54 This study
S1PRV569R2 TTGAATAGTCAGGGAAAGA 551–569 Reverse 54 This study
S1PRV12F1 CCTCTGGAGACCTTGGCTTG 495–514 Forward 60 This study
S1PRV244R CAGGTACATCGCGATGGGAA 708–727 Reverse 60 This study
S1PRV25F CCGCAAATCAGTTCCCACAC 657–676 Forward 60 This study
S1PRV238R ATTCCAGAGAGCGCCATTCC 818–838 Reverse 60 This study
S1PRV56F CATTGAAGCTAAGCGACGCC 439–458 Forward 60 This study
S1PRV246R CAGTCTTCTGCTCCACTGGG 610–629 Reverse 60 This study
S1PRV12F2 ATCAATGCGATGGCGAAACG 246–286 Forward 60 This study
S1PRV224R GGCGTCGCTTAGCTTCAATG 708–727 Reverse 60 This study
S1PRV33F TGTGGGATCATTCTGCACCC 267–286 Forward 60 This study
S1PRV6F CATTGAAGCTAAGCGACGCC 439–458 Forward 60 This study
S1PRV197R CCAGTCTTCTGCTCCACTGG 611–630 Reverse 60 This study