Table 4.
Class | miRNA_Acc. | Target Acc. Number | Inhibition | Target description |
---|---|---|---|---|
H.O.R. | pda-miR529e | PDK_30s774191g002 | Cleavage | Abscisic acid responsive elements-binding factor |
pda-miR160b, pda-miR160a, pda-miR160a | PDK_30s951701g002 | Cleavage | Auxin response factor 17-like | |
pda-miR156g, pda-miR156c | PDK_30s928741g002 | Cleavage | Cytokinin dehydrogenase 3-like | |
pda-3p-130659_69 | PDK_30s65509272g006 | Cleavage | Gibberellin 2-beta-dioxygenase 8-like | |
pda-3p-44090_382 | PDK_30s1006281g001 | Cleavage | IAA-amino acid hydrolase ilr1-like 6-like | |
K.I.N. | pda-miR166a | PDK_30s6550978g002 | Cleavage | Calcium-dependent protein kinase 28-like |
pda-miR397 | PDK_30s903491g006 | Cleavage | Mitogen-activated protein kinase | |
T.F | pda-3p-313824_18 | PDK_30s770411g002 | Cleavage | C-myb-like transcription factor myb3r-4 |
pda-miR396 | PDK_30s1150791g004 | Translation | Ethylene-responsive transcription factor rap2-2-like | |
pda-miR167a, pda-miR167c | PDK_30s1201081g001 | Cleavage | F-box protein skip16-like | |
pda-miR172a, pda-miR172i, pda-miR172c | PDK_30s749921g002 | Cleavage | Floral homeotic protein apetala 2-like | |
pda-miR164, pda-miR164, pda-miR164a | PDK_30s1198591g001 | Cleavage | Nac domain-containing protein 21 22-like | |
pda-miR156a, pda-miR156c, pda-miR156h, pda-miR156e, pda-miR156g, pda-miR529e, pda-miR156b | PDK_30s756061g001 | Cleavage | Promoter-binding protein spl9 | |
pda-miR156h | PDK_30s1139181g002 | Translation | Squamosa promoter-binding-like protein 16 | |
T.S.P. | pda-miR828a | PDK_30s927361g003 | Cleavage | Abc transporter f family member 3 |
pda-miR393a | PDK_30s947241g003 | Cleavage | Transport inhibitor response 1-like protein | |
pda-miR535 | PDK_30s1187081g002 | Cleavage | potassium channel akt2-like | |
pda-5p-5696_4736 | PDK_30s693381g001 | Cleavage | Vacuolar protein sorting-associated protein 41 homolog |
The genes were classified as hormones (H.O.R.), Kinases (K.I.N.), Transcription factors (T.F.), or transportation (T.S.P.)-related function. The miRNAs were selected based on their targets, which could have a functional relationship to salinity tolerance mechanisms in plants.