Table 2. Markers significantly associated with backtest traits including latency (L) until the first response, duration (D) of responses and frequency (F) of responses in piglets at 5, 12, 19 and 26 days (d) of age.
| SNP ID | Backtest | −log10 | % variance | FDR | SSC (Mb) | Gene |
|---|---|---|---|---|---|---|
| ALGA0090009 | Dd5 | 6.15 | 9.5 | 0.018 | 16 (31.0) | HCN1 |
| ALGA0112274 | Dd5 | 6.02 | 9.3 | 0.018 | ||
| ALGA0090013 | Dd5 | 5.86 | 9.0 | 0.018 | 16 (31.0) | HCN1 |
| DIAS0001557 | Dd5 | 5.69 | 8.8 | 0.018 | 12 (55.9) | RANGRF |
| M1GA0008168 | Dd5 | 5.50 | 8.5 | 0.018 | 5 (106.4) | |
| ALGA0067468 | Dd12 | 5.63 | 8.7 | 0.035 | 13 (3.4) | |
| ALGA0067470 | Dd12 | 5.63 | 8.7 | 0.035 | 13 (3.3) | |
| ASGA0102838 | Dd12 | 5.50 | 8.5 | 0.035 | 12 (55.6) | |
| ASGA0104602 | Dd12 | 5.49 | 8.5 | 0.035 | 2 (15.5) | |
| ASGA0055092 | Dd12 | 5.35 | 8.3 | 0.035 | 12 (55.8) | PER1 |
| ASGA0055092 | Dd19 | 7.45 | 11.3 | 0.001 | 12 (55.8) | PER1 |
| ASGA0102838 | Dd19 | 7.38 | 11.2 | 0.001 | 12 (55.6) | |
| ALGA0066975 | Dd19 | 6.59 | 10.1 | 0.003 | 12 (55.7) | |
| ALGA0121951 | Dd19 | 6.57 | 10.1 | 0.003 | 12 (55.9) | |
| ALGA0095323 | Dd19 | 6.34 | 9.7 | 0.004 | 17 (50.7) | |
| DIAS0001557 | Dd26 | 6.23 | 9.6 | 0.019 | 12 (55.9) | RANGRF |
| ASGA0055076 | Dd26 | 6.07 | 9.3 | 0.019 | 12 (55.2) | ATP1B2 |
| DIAS0000983 | Dd26 | 5.86 | 9.0 | 0.019 | 5 (7.3) | |
| ALGA0107834 | Dd26 | 5.78 | 8.9 | 0.019 | 3 (139.8) | ASGR1 |
| ASGA0085214 | Dd26 | 5.55 | 8.6 | 0.019 | 12 (54.6) | |
| ALGA0115736 | Fd5 | 6.33 | 9.9 | 0.021 | 2 (1.5) | liprin-alpha-1-like |
| ASGA0102974 | Fd5 | 5.65 | 8.8 | 0.041 | ||
| ASGA0076061 | Fd5 | 5.57 | 8.7 | 0.041 | 17 (32.2) | LOC100511790 |
| CASI0009812 | Fd5 | 5.36 | 8.4 | 0.045 | 4 (92.9) | |
| ASGA0040214 | Fd5 | 5.23 | 8.2 | 0.045 | 8 (141.7) | |
| ALGA0056876 | Fd12 | 6.60 | 8.9 | 0.007 | 10 (10.6) | |
| ASGA0102838 | Fd12 | 6.54 | 10.1 | 0.007 | 12 (55.6) | |
| ASGA0055092 | Fd12 | 6.21 | 9.6 | 0.010 | 12 (55.8) | PER1 |
| ALGA0066975 | Fd12 | 5.85 | 9.1 | 0.011 | 12 (55.9) | |
| ALGA0066986 | Fd12 | 5.82 | 9.0 | 0.011 | 12 (56.1) | |
| ALGA0115736 | Fd19 | 5.53 | 8.6 | 0.033 | 2 (1.5) | liprin-alpha-1-like |
| ASGA0102838 | Fd19 | 5.47 | 8.6 | 0.033 | 12 (55.6) | |
| ASGA0055092 | Fd19 | 5.46 | 8.5 | 0.033 | 12 (55.8) | PER1 |
| H3GA0056700 | Fd19 | 5.31 | 8.3 | 0.033 | ||
| ALGA0066975 | Fd19 | 5.23 | 8.2 | 0.033 | 12 (55.9) | |
| ALGA0096195 | Fd26 | 5.19 | 8.1 | 0.043 | 17 (64.1) | |
| ALGA0104320 | Fd26 | 5.11 | 8.0 | 0.043 | 1 (22.5) | |
| ALGA0107609 | Fd26 | 5.11 | 8.0 | 0.043 | 1 (22.3) | |
| ASGA0094670 | Fd26 | 5.11 | 8.0 | 0.043 | 1 (22.5) | |
| ASGA0055092 | Fd26 | 5.10 | 8.0 | 0.043 | 12 (55.8) | PER1 |
| ALGA0066975 | Ld12 | 6.47 | 9.9 | 0.006 | 12 (55.9) | |
| ASGA0055092 | Ld12 | 6.39 | 9.8 | 0.006 | 12 (55.8) | PER1 |
| ALGA0121951 | Ld12 | 6.34 | 9.7 | 0.006 | 12 (55.9) | |
| ALGA0066986 | Ld12 | 6.12 | 9.4 | 0.006 | 12 (56.1) | |
| ASGA0099599 | Ld12 | 6.12 | 9.4 | 0.006 | 12 (55.1) |