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. 2015 Nov 4;16:358. doi: 10.1186/s12859-015-0793-8

Table 4.

List of the largest differences in abundance between omnivores and vegetarians in the 16S data collected from the American Gut Project using LefSe. Note that LefSe does not return the Greengenes IDs

Operation taxonomic unit classification
Bacteria, Actinobacteria, Actinobacteria, Actinomycetales, Actinomycetaceae, Actinobaculum
Bacteria, Actinobacteria, Actinobacteria, Actinomycetales, Micrococcaceae, Kocuria, rhizophila
Bacteria, Proteobacteria, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Dyella
Archaea, Euryarchaeota, Methanomicrobia, Methanosarcinales
Bacteria, Proteobacteria, Alphaproteobacteria, Rhizobiales, Bradyrhizobiaceae, Bradyrhizobium
Bacteria, Actinobacteria, Actinobacteria, Actinomycetales, Mycobacteriaceae, Mycobacterium, celatum
Bacteria, Actinobacteria, Actinobacteria, Bifidobacteriales, Bifidobacteriaceae, Alloscardovia
Bacteria, Actinobacteria, Actinobacteria, Actinomycetales, Mycobacteriaceae
Bacteria, Actinobacteria, Actinobacteria, Actinomycetales, Actinomycetaceae, Actinomyces, europaeus
Bacteria, Actinobacteria, Actinobacteria, Actinomycetales, Micromonosporaceae
Bacteria, Proteobacteria, Betaproteobacteria, Burkholderiales, Comamonadaceae, Paucibacter
Bacteria, Firmicutes, Bacilli, Bacillales, Bacillaceae, Bacillus, coagulans
Bacteria, Firmicutes, Bacilli, Bacillales, Bacillaceae, Bacillus, humi
Archaea, Euryarchaeota, Methanomicrobia, Methanosarcinales, Methanosarcinaceae, Methanosarcina, mazei
Archaea, Euryarchaeota, Methanomicrobia
Archaea, Euryarchaeota, Methanomicrobia, Methanosarcinales, Methanosarcinaceae
Bacteria, Bacteroidetes, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Capnocytophaga
Bacteria, Proteobacteria, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Acetobacter
Bacteria, Actinobacteria, Actinobacteria, Actinomycetales, Nocardioidaceae, Nocardioides