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. 2015 Nov 4;16:368. doi: 10.1186/s12859-015-0754-2

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© Pirayre et al. 2015

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 6 — Example of network built using BRANE Cut on the E. coli dataset. Legend: black nodes: transcription factors, gray nodes: other genes. Green edges: inferred regulations also reported in the gold standard, blue edges: new inferred regulations that are also inferred by GENIE3, and pink edges: new inferred regulations