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. 2015 Nov 6;5:16326. doi: 10.1038/srep16326

Table 1. List of haloarchaea and methanoarchaea used in this study as well as the growth conditions, accession numbers of 16S rRNA genes, and re-identified scores.

Organism Medium NaCl (%) Methanogenesis substrate Accession number Re-identified score
Haloarchaea
Haloarcula argentinensis ATCC 700875T NHA 24 – NR_116080 2.673 ± 0.019
Haloarcula hispanica ATCC 33960T NHA 24 – NR_113419 2.601 ± 0.033
Haloarcula japonica ATCC 49778T NHA 24 – NR_116082 2.314 ± 0.067
Haloarcula marismortui ATCC 43049T NHA 24 – NR_121590, AY596298a, NR_074201 2.504 ± 0.025
Haloarcula quadrata ATCC 700850T NHA 24 – EF645689, EF645694 2.479 ± 0.016
Haloarcula vallismortis ATCC 29715T NHA 24 – NR_113424 2.569 ± 0.018
Natrinema pellirubrum JCM 10476T NHA 24 – NR_113528 2.141 ± 0.054
Haloterrigena turkmenica DSM 5511T NHA 24 – NR_074238 2.272 ± 0.016
Haloterrigena thermotolerans DSM 11552T NHA 24 – NR_113514 2.715 ± 0.030
Haloterrigena saccharevitans JCM 12889T NHA 24 – NR_113512 2.709 ± 0.014
Haloterrigena hispanica DSM 18328T NHA 24 – NR_113508 2.692 ± 0.036
Haloarcula sp. HLR1 NHA 24 – DQ089681 2.414 ± 0.004
Haloarcula sp. HLR2 NHA 24 – DQ089682 2.403 ± 0.031
Haloarcula sp. HLR3 NHA 24 – KP326318 2.196 ± 0.037
Haloarcula sp. HLR4 NHA 24 – DQ089683 2.378 ± 0.017
Haloarcula sp. HLR5 NHA 24 – DQ089684, DQ089685 2.263 ± 0.052
Haloarcula sp. HLR6 NHA 24 – DQ089686 2.218 ± 0.128
Natrinema sp. HLW1 NHA 24 – KP326314 2.528 ± 0.049
Natrinema sp. HLW2 NHA 24 – KP326315 2.564 ± 0.042
Natrinema sp. HLW3 NHA 24 – KP326316 2.405 ± 0.020
Natrinema sp. HLW4 NHA 24 – KP326317 2.550 ± 0.029
Haloterrigena sp. H1 NHA 24 – AF478471 2.402 ± 0.077
Haloterrigena sp. H4 NHA 24 – AY546002 2.380 ± 0.103
Haloterrigena sp. H5 NHA 24 – KP702942 2.755 ± 0.025
Haloterrigena sp. H6 NHA 24 – AY546107 2.725 ± 0.048
Haloterrigena sp. H7 NHA 24 – KP702943 2.535 ± 0.060
Haloterrigena sp. H8 NHA 24 – KP702944 2.582 ± 0.055
Haloterrigena sp. H9 NHA 24 – KP702945 2.662 ± 0.060
Haloterrigena sp. H10 NHA 24 – KP702946 2.470 ± 0.085
Haloterrigena sp. H11 NHA 24 – KP702947 2.413 ± 0.037
Haloterrigena sp. H12 NHA 24 – KP702948 2.558 ± 0.015
Haloterrigena sp. H13 NHA 24 – AY055733 2.390 ± 0.009
Halophilic methanoarchaea
Methanohalophilus portucalensis FDF1T H-P 12 40 mM trimethylamine NR_042826 2.676 ± 0.015
Methanohalophilus portucalensis FDF2 H-P 12 40 mM trimethylamine KT285318 2.655 ± 0.010
Methanohalophilus sp. RET-1 H-P 12 40 mM trimethylamine KT285314 2.552 ± 0.028
Methanohalophilus sp. SF-1 H-P 12 40 mM trimethylamine KT285312 2.669 ± 0.035
Methanohalophilus sp. SF-2 H-P 12 40 mM trimethylamine KT285313 2.597 ± 0.027
Methanohalophilus portucalensis Z-7302 H-P 12 40 mM trimethylamine KT285311 2.370 ± 0.019
Methanohalophilus portucalensis Z-7401 H-P 12 40 mM trimethylamine KT285317 2.561 ± 0.037
Methanohalophilus sp. Z-7404 H-P 12 40 mM trimethylamine KT285315 2.573 ± 0.016
Methanohalophilus portucalensis Z-7301 H-P 12 40 mM trimethylamine KT285316 2.506 ± 0.005
Methanohalophilus mahii DSM 5219T H-P 12 40 mM trimethylamine M59133 2.350 ± 0.047
Methanococcoides methylutens Cas-1 H-P 4 40 mM trimethylamine KT285309 2.667 ± 0.019
Methanolobus taylorii GS-16 T H-P 4 40 mM trimethylamine KT285308 2.640 ± 0.026
Methanohalobium evestigatum SD-1 H-P 12 40 mM trimethylamine KT285310 2.297 ± 0.018
Halotolerant and non-halophilic methanoarchaea
Methanolobus vulcani DSM 3029T MB/W 0.5 50 mM methanol NR_044768 2.574 ± 0.047
Methanolobus chelungpuianus St545MbT MB/W 0.5 50 mM methanol EU293796 2.312 ± 0.003
Methanofollis formosanus ML15T MB/W 0.5 50 mM formate + 20 mM acetate NR_042767 2.594 ± 0.047
Methanofollis aquaemaris N2F9704T MB/W 0.5 50 mM formate + 20 mM acetate NR_041801 2.671 ± 0.011
Methanocorpusculum sinense DSM 4274T MB/W 0.5 50 mM formate + 20 mM acetate NR_117148 2.193 ± 0.089
Methanocorpusculum parvum DSM 3823T MB/W 0.5 50 mM formate + 20 mM acetate NR_044728 2.501 ± 0.030
Methanocorpusculum parvum IF9601b MB/W 0.5 50 mM formate + 20 mM acetate AY057068 2.444 ± 0.023
Methanocorpusculum labreanum DSM 4855T MB/W 0.5 50 mM formate + 20 mM acetate AY260436 2.441 ± 0.019
Methanocorpusculum bavaricum DSM 4179T MB/W 0.5 50 mM formate + 20 mM acetate AY196676 2.475 ± 0.044
Methanoculleus chikugoensis Afa-1 MB/W 0.5 50 mM formate + 20 mM acetate KP702949 2.731 ± 0.013
Methanobacterium palustre FG694aF MB/W 0.5 50 mM formate + 20 mM acetate EU293795 2.302 ± 0.020
Methanosarcina mazei O1M9701 MB/W 0.5 50 mM methanol AF411469 2.649 ± 0.008
Methanosarcina mazei O1M9704b MB/W 0.5 50 mM methanol AF411467 2.471 ± 0.021
Methanosarcina mazei O1M9702 MB/W 0.5 50 mM methanol AF411468 2.783 ± 0.006
Methanosarcina mazei FA9604c MB/W 0.5 40 mM TMA + 20 mM acetate AF262036 2.615 ± 0.063
Methanococcus voltaei P2F9701a MB/W 0.5 50 mM formate + 20 mM acetate AF306670 2.266 ± 0.041
Methanocalculus taiwanensis P2F9705 MB/W 0.5 50 mM formate + 20 mM acetate AF411470 2.609 ± 0.036
Methanocalculus taiwanensis P2F9704aT MB/W 0.5 50 mM formate + 20 mM acetate AF172443 2.600 ± 0.038
Methanocalculus pumilus MHT-1T MB/W 0.5 50 mM formate + 20 mM acetate NR_028148 2.751 ± 0.035
Methanocalculus halotolerans SEBR 4845T MB/W 5.0 50 mM formate + 20 mM acetate NR_024870 2.713 ± 0.024
Methanocalculus sp. O1F9702c MB/W 0.5 50 mM formate + 20 mM acetate AY026256 2.446 ± 0.038
Methanocalculus chunghsingensis K1F9705bT MB/W 0.5 50 mM formate + 20 mM acetate NR_041828 2.490 ± 0.043
Methanocalculus chunghsingensis O1F9704a MB/W 0.5 50 mM formate + 20 mM acetate AY234332 2.540 ± 0.065
Methanocalculus chunghsingensis K1F9705c MB/W 0.5 50 mM formate + 20 mM acetate AF321115 2.520 ± 0.020

aThe sequence of rrnaB was revealed from whole genome sequence.