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. 2015 Jul;96(Pt 7):1863–1872. doi: 10.1099/vir.0.000106

Table 3. Primer sequences.

Primer Sequence (5′→3′)* Reference†
Canine γ-actin 5′ 6-FAM-ACCACTGGTATTGTCATGGACTCTG Gentilini et al. (2009)
Canine γ-actin 272 bp 3′ GCTCTTCTCCAGGGAGGACGA Gentilini et al. (2009)
Canine γ-actin 720 bp 3′ TGGCTTTTAGCTCACGGCACC
POL1A (5′ outer) HEX-GACTTTCCAAGTTTCTAYCCNAGYATHAT Gallagher et al. (2002)
POL1B (5′ outer) HEX-GACTTTCCAAGTTTCTAYCCNTCNATHAT Gallagher et al. (2002)
POL2B (3′ outer and inner) 6-FAM-TTGATTAAGACGGAGTCNGTRTCNCCRTA Jarrett et al. (2013)
POL3A (5′ inner) HEX-GTTTGATGCCGACCTTAYGGNTTYACNGG Gallagher et al. (2002)
POL3B (5′ inner) HEX-GTTTGATGCCGACCTTAYGGNGTNACNGG Gallagher et al. (2002)
2760s (gB 5′) HEX-AAGATCAACCCCACNAGNGTNATG Ehlers et al. (2008)
2761as (gB 3′) 6-FAM-GTGTAGTAGTTGTACTCCCTRAACATNGTYTC Ehlers et al. (2008)
Huang 5′ GGGGTGGCCAACGGCCTCTTT Huang et al. (2012)
Huang 3′ TMMTYCGTAGCTGACTCGGGTGA Huang et al. (2012)
BamHI W 5′ CCCCTGGTATAAAGTGGTCCTG Gallagher et al. (2003)
BamHI W probe 6-FAM-AGCTATTTCTGGTCGCATCAGAGCGC-TAMRA Gallagher et al. (2003)
BamHI W 3′ CCCTCTTACATTTGTGTGGACTCC Gallagher et al. (2003)
*

Dye labels are shown where appropriate. Clamp sequences in POL primers are shown in italics. Degenerate bases: Y = C or T; N = A, C, G or T; H = A, C or T; R = A or G; M = A or C.

References indicate source of previously described primers.