Table 1.
The information of ARF family genes in Carica papaya a
| Deduced polypeptide | ||||||||
|---|---|---|---|---|---|---|---|---|
| Gene ID | Nameb | Locationc | Direction | ORF length | Introns | Length (aa) | Mol wt (kDa) | pI |
| evm. TU.supercontig_9.161 | CpARF1 | supercontig_9:969763..974848 | Reverse | 2094 | 13 | 698 | 77.67 | 7.18 |
| evm.TU.contig_31756.1 | CpARF2 | contig_31756:3939..7439 | Forward | 1855 | 11 | 619 | 68.86 | 7.12 |
| evm.TU.supercontig_7.3 | CpARF3 | supercontig_7:132322..138926 | Reverse | 2022 | 10 | 674 | 73.19 | 7.01 |
| evm.TU.supercontig_139.80 | CpARF4 | supercontig_139:638531..645762 | Reverse | 2439 | 11 | 813 | 89.78 | 6.58 |
| evm.TU.supercontig_26.24 | CpARF5 | supercontig_26:231561..267729 | Reverse | 2814 | 13 | 938 | 103.7 | 5.16 |
| evm.TU.supercontig_17.53 | CpARF6 | supercontig_17:617715..620541 | Reverse | 933 | 8 | 311 | 34.83 | 9.03 |
| evm.TU.supercontig_261.2 | CpARF7 | supercontig_261:2520..11208 | Reverse | 2649 | 12 | 883 | 97.65 | 5.52 |
| evm.TU.supercontig_65.4 | CpARF10 | supercontig_65:11160..14085 | Reverse | 1944 | 4 | 648 | 71.54 | 7.06 |
| evm.TU.supercontig_96.40 | CpARF11 | supercontig_96:684489..688508 | Forward | 2064 | 13 | 688 | 76.05 | 6.66 |
| evm.TU.supercontig_53.88 | CpARF16 | supercontig_53:584129..586644 | Reverse | 2091 | 2 | 697 | 76.94 | 6.57 |
| evm.TU.supercontig_49.122 | CpARF17 | supercontig_49:862531..867248 | Reverse | 1809 | 1 | 603 | 66.22 | 6.51 |
aThe information listed in table was obtained from Phytozome 10.1
bNames of ARF genes in Carica papaya were based on the nomenclature used in the Arabidopsis model species
cThe location of different CpARF genes on each contig or supercontig