Table 1.
Proportion of homogeneity (purity) for 80 samples from 16 inbred lines using 191 KASP and 257,268 GBS markers
No | Name | Seed class | Source | Homogeneity (%) | |
---|---|---|---|---|---|
KASP | GBS | ||||
1 | SC22_AR | Basic | AgriCEFT | 65 | 79 |
2 | SC22_AR09 | Pre-basic | AARC | 59 | 76 |
3 | SC22_BARC2011k | Basic | BARC | 66 | 80 |
4 | SC22_BARC2012k | Basic | BARC | 69 | 81 |
5 | SC22_EB | Nucleolus | BNMR | 79 | 86 |
6 | SC22_GB | Gene bank | Gene Bank | 73 | 82 |
7 | SC22_HD04/05 | Pre-basic | HARC | 63 | 79 |
8 | SC22_I11B | Pre-basic | BNMR | 67 | 81 |
9 | SC22_I12B | Pre-basic | BNMR | 64 | 80 |
10 | 124-b(113)_AR09 | Pre-basic | AARC | 88 | 88 |
11 | 124-b(113)_ASE | Basic | ASE | 76 | 83 |
12 | 124-b(113)_BARC2010k | Basic | BARC | 82 | 85 |
13 | 124-b(113)_BARC2011k | Basic | BARC | 84 | 85 |
14 | 124-b(113)_EB | Nucleolus | BNMR | 88 | 89 |
15 | 124-b(113)_GB | Gene bank | Gene Bank | 89 | 89 |
16 | 124-b(113)_HD | Pre-basic | HARC | 75 | 82 |
17 | 124-b(113)_HD04/05 | Pre-basic | HARC | 69 | 80 |
18 | 124-b(113)_I12K | pre-basic | BNMR | 83 | 85 |
19 | 124-b(109)_EB | Nucleolus | BNMR | 68 | 81 |
20 | 124-b(109)_HD04/05 | Pre-basic | HARC | 58 | 74 |
21 | 124-b(109)_I11B | Pre-basic | BNMR | 59 | 74 |
22 | 124-b(109)_I13B | Pre-basic | BNMR | 56 | 74 |
23 | CML197 | CIMMYT | CIMMYT | 91 | 100 |
24 | CML197_EB | Nucleolus | BNMR | 73 | 85 |
25 | CML197_HD03/04 | Pre-basic | HARC | 69 | 84 |
26 | CML197_I10K | Pre-basic | BNMR | 69 | 84 |
27 | CML197_I11K | Pre-basic | BNMR | 72 | 85 |
28 | CML197_I12K | Pre-basic | BNMR | 67 | 85 |
29 | CML312 | CIMMYT | CIMMYT | 100 | 100 |
30 | CML312_EB | Nucleolus | BNMR | 99 | 100 |
31 | A7033_AR02/03E.C | Pre-basic | AgriCEFT | 61 | 79 |
32 | A7033_AR08 | Pre-basic | AARC | 63 | 80 |
33 | A7033_EB | Nucleolus | BNMR | 75 | 85 |
34 | A7033_GB | Gene bank | Gene Bank | 76 | 84 |
35 | A7033_HD | Pre-basic | HARC | 61 | 82 |
36 | A7033_I10K | Pre-basic | BNMR | 62 | 80 |
37 | A7033_I11K | Pre-basic | BNMR | 65 | 81 |
38 | A7033_selected | Breeder seed | BNMR | 70 | 84 |
39 | F7215_AR02/03E.C | Pre-basic | AgriCEFT | 63 | 77 |
40 | F7215_AR08 | Pre-basic | AARC | 69 | 78 |
41 | F7215_EB | Nucleolus | BNMR | 77 | 82 |
42 | F7215_GB | Gene bank | Gene Bank | 64 | 78 |
43 | F7215_HD04/05 | Pre-basic | HARC | 67 | 77 |
44 | F7215_I11K | Pre-basic | BNMR | 65 | 77 |
45 | F7215_I12K | Pre-basic | BNMR | 67 | 78 |
46 | F7215_selected | breeder seed | BNMR | 70 | 80 |
47 | 142-1-e_AR02/03E.C | Basic | AgriCEFT | 82 | 83 |
48 | 142-1-e_EB | Nucleolus | BNMR | 89 | 86 |
49 | 142-1-e_GB | Gene bank | Gene Bank | 89 | 87 |
50 | 142-1-e_I10K | Pre-basic | BNMR | 85 | 85 |
51 | 142-1-e_I12K | Pre-basic | BNMR | 87 | 84 |
52 | CML202 | CIMMYT | CIMMYT | 99 | 100 |
53 | CML202_12K | Pre-basic | BNMR | 99 | 99 |
54 | CML202_EB | Nucleolus | BNMR | 99 | 99 |
55 | CML202_HD04/05 | Pre-basic | HARC | 96 | 99 |
56 | CML202_I11K | pre-basic | BNMR | 92 | 98 |
57 | CML395 | CIMMYT | CIMMYT | 100 | 100 |
58 | CML395_12K | Pre-basic | BNMR | 64 | 81 |
59 | CML395_EB | Nucleolus | BNMR | 49 | 77 |
60 | CML395_HD | Pre-basic | HARC | 60 | 81 |
61 | CML395_I11K | Pre-basic | BNMR | 59 | 81 |
62 | 144-7-b_I08K | Pre-basic | BNMR | 80 | 84 |
63 | 144-7-b_I09k | Pre-basic | BNMR | 79 | 83 |
64 | 144-7-b_I10k | Pre-basic | BNMR | 81 | 84 |
65 | CML144 | CIMMYT | CIMMYT | 99 | 100 |
66 | CML144_EB | Nucleus | BNMR | 98 | 99 |
67 | CML144_I11B | Pre-basic | BNMR | 98 | 98 |
68 | CML144_I13B | Pre-basic | BNMR | 96 | 97 |
69 | CML159_EB | Nucleolus | BNMR | 98 | 99 |
70 | CML159_I09K | Pre-basic | BNMR | 93 | 97 |
71 | CML159_I13B | Pre-basic | BNMR | 90 | 96 |
72 | CML176_EB | Nucleolus | BNMR | 87 | 94 |
73 | CML176_I12K | Pre-basic | BNMR | 83 | 94 |
74 | CML161 | CIMMYT | CIMMYT | 100 | 100 |
75 | CML161_I12B | Pre-basic | BNMR | 99 | 100 |
76 | CML161_I13B | Pre-basic | BNMR | 100 | 100 |
77 | CML165 | CIMMYT | CIMMYT | 98 | 100 |
78 | CML165_EB | Nucleolus | BNMR | 95 | 98 |
79 | CML165_I11B | Pre-basic | BNMR | 98 | 99 |
80 | CML165_I12B | Pre-basic | BNMR | 88 | 93 |