Table 1. Exome sequencing of BCSCs, non-BCSCs, NBBCs and non-NBBCs.
BCSCs | CHROM | POS | REF | ALT | QUAL | FILTER | Func | Gene | ExonicFunc | cytoband |
4 | 1807894 | G | T | 7514.77 | PASS | exonic | FGFR3 | nonsynonymous SNV | 4p16.3 | |
5 | 1255520 | G | A | 2957.77 | PASS | exonic | TERT | nonsynonymous SNV | 5p15.33 | |
12 | 25362217 | A | G | 113.9 | PASS | UTR3 | KRAS | . | 12p12.1 | |
12 | 25368462 | C | G | 3109.77 | PASS | exonic | KRAS | nonsynonymous SNV | 12p12.1 | |
12 | 25388290 | G | T | 31.74 | PASS | intronic | KRAS | . | 12p12.1 | |
13 | 48919358 | T | G | 764.77 | PASS | intronic | RB1 | . | 13q14.2 | |
13 | 48947469 | G | T | 539.77 | PASS | intronic | RB1 | . | 13q14.2 | |
13 | 49027140 | A | C | 150.77 | PASS | exonic | RB1 | nonsynonymous SNV | 13q14.2 | |
13 | 49051012 | C | T | 2518.77 | PASS | intronic | RB1 | . | 13q14.2 | |
16 | 3781313 | G | G | 6740.77 | PASS | exonic | CREBBP | nonsynonymous SNV | 16p13.3 | |
16 | 3811556 | A | G | 15232.77 | PASS | intronic | CREBBP | . | 16p13.3 | |
16 | 3811596 | C | T | 8497.77 | PASS | intronic | CREBBP | . | 16p13.3 | |
22 | 41513175 | T | C | 281.77 | PASS | intronic | EP300 | . | 22q13.2 | |
22 | 41537234 | G | T | 1184.77 | PASS | intronic | EP300 | . | 22q13.2 | |
22 | 41543983 | C | G | 2608.77 | PASS | intronic | EP300 | . | 22q13.2 | |
22 | 41551039 | T | A | 10641.77 | PASS | exonic | EP300 | synonymous SNV | 22q13.2 | |
22 | 41553259 | G | T | 565.77 | PASS | exonic | EP300 | nonsynonymous SNV | 22q13.2 | |
non-BCSCs | CHROM | POS | REF | ALT | QUAL | FILTER | Func | Gene | ExonicFunc | cytoband |
4 | 1807894 | G | T | 19732.77 | PASS | exonic | FGFR3 | nonsynonymous SNV | 4p16.3 | |
12 | 25362217 | A | G | 54.28 | PASS | UTR3 | KRAS | . | 12p12.1 | |
12 | 25368462 | C | A | 279.78 | PASS | exonic | KRAS | nonsynonymous SNV | 12p12.1 | |
13 | 49051012 | C | T | 210.78 | PASS | intronic | RB1 | . | 13q14.2 | |
16 | 3811556 | A | G | 5398.77 | PASS | intronic | CREBBP | . | 16p13.3 | |
16 | 3811596 | C | T | 2659.77 | PASS | intronic | CREBBP | . | 16p13.3 | |
16 | 3828847 | C | CT | 33.73 | PASS | intronic | CREBBP | . | 16p13.3 | |
22 | 41513175 | T | C | 153.77 | PASS | intronic | EP300 | . | 22q13.2 | |
22 | 41537234 | G | T | 198.78 | PASS | intronic | EP300 | . | 22q13.2 | |
22 | 41543983 | C | G | 636.77 | PASS | intronic | EP300 | . | 22q13.2 | |
22 | 41553259 | G | A | 214.77 | PASS | exonic | EP300 | synonymous SNV | 22q13.2 | |
NBBCs | CHROM | POS | REF | ALT | QUAL | FILTER | Func | Gene | ExonicFunc | cytoband |
12 | 25368462 | C | T | 161.84 | PASS | exonic | KRAS | . | 12p12.1 | |
12 | 25388290 | G | T | 35.74 | PASS | intronic | KRAS | synonymous SNV | 12p12.1 | |
13 | 48919358 | T | G | 83.28 | PASS | intronic | RB1 | . | 13q14.2 | |
13 | 48947469 | G | T | 112.9 | PASS | intronic | RB1 | . | 13q14.2 | |
16 | 3811556 | A | G | 5016.77 | PASS | intronic | CREBBP | . | 16p13.3 | |
22 | 41537234 | G | T | 285.77 | PASS | intronic | EP300 | . | 22q13.2 | |
22 | 41543983 | C | G | 671.77 | PASS | intronic | EP300 | . | 22q13.2 | |
non-NBBCs | CHROM | POS | REF | ALT | QUAL | FILTER | Func | Gene | ExonicFunc | cytoband |
12 | 25368462 | C | T | 161.84 | PASS | exonic | KRAS | . | 12p12.1 | |
12 | 25388290 | G | T | 35.74 | PASS | intronic | KRAS | synonymous SNV | 12p12.1 | |
13 | 48947469 | G | T | 112.9 | PASS | intronic | RB1 | . | 13q14.2 | |
16 | 3811556 | A | G | 5016.77 | PASS | intronic | CREBBP | . | 16p13.3 | |
22 | 41543983 | C | G | 671.77 | PASS | intronic | EP300 | . | 22q13.2 |