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. 2015 Jun 17;6(23):19542–19551. doi: 10.18632/oncotarget.4295

Table 1. Exome sequencing of BCSCs, non-BCSCs, NBBCs and non-NBBCs.

BCSCs CHROM POS REF ALT QUAL FILTER Func Gene ExonicFunc cytoband
4 1807894 G T 7514.77 PASS exonic FGFR3 nonsynonymous SNV 4p16.3
5 1255520 G A 2957.77 PASS exonic TERT nonsynonymous SNV 5p15.33
12 25362217 A G 113.9 PASS UTR3 KRAS . 12p12.1
12 25368462 C G 3109.77 PASS exonic KRAS nonsynonymous SNV 12p12.1
12 25388290 G T 31.74 PASS intronic KRAS . 12p12.1
13 48919358 T G 764.77 PASS intronic RB1 . 13q14.2
13 48947469 G T 539.77 PASS intronic RB1 . 13q14.2
13 49027140 A C 150.77 PASS exonic RB1 nonsynonymous SNV 13q14.2
13 49051012 C T 2518.77 PASS intronic RB1 . 13q14.2
16 3781313 G G 6740.77 PASS exonic CREBBP nonsynonymous SNV 16p13.3
16 3811556 A G 15232.77 PASS intronic CREBBP . 16p13.3
16 3811596 C T 8497.77 PASS intronic CREBBP . 16p13.3
22 41513175 T C 281.77 PASS intronic EP300 . 22q13.2
22 41537234 G T 1184.77 PASS intronic EP300 . 22q13.2
22 41543983 C G 2608.77 PASS intronic EP300 . 22q13.2
22 41551039 T A 10641.77 PASS exonic EP300 synonymous SNV 22q13.2
22 41553259 G T 565.77 PASS exonic EP300 nonsynonymous SNV 22q13.2
non-BCSCs CHROM POS REF ALT QUAL FILTER Func Gene ExonicFunc cytoband
4 1807894 G T 19732.77 PASS exonic FGFR3 nonsynonymous SNV 4p16.3
12 25362217 A G 54.28 PASS UTR3 KRAS . 12p12.1
12 25368462 C A 279.78 PASS exonic KRAS nonsynonymous SNV 12p12.1
13 49051012 C T 210.78 PASS intronic RB1 . 13q14.2
16 3811556 A G 5398.77 PASS intronic CREBBP . 16p13.3
16 3811596 C T 2659.77 PASS intronic CREBBP . 16p13.3
16 3828847 C CT 33.73 PASS intronic CREBBP . 16p13.3
22 41513175 T C 153.77 PASS intronic EP300 . 22q13.2
22 41537234 G T 198.78 PASS intronic EP300 . 22q13.2
22 41543983 C G 636.77 PASS intronic EP300 . 22q13.2
22 41553259 G A 214.77 PASS exonic EP300 synonymous SNV 22q13.2
NBBCs CHROM POS REF ALT QUAL FILTER Func Gene ExonicFunc cytoband
12 25368462 C T 161.84 PASS exonic KRAS . 12p12.1
12 25388290 G T 35.74 PASS intronic KRAS synonymous SNV 12p12.1
13 48919358 T G 83.28 PASS intronic RB1 . 13q14.2
13 48947469 G T 112.9 PASS intronic RB1 . 13q14.2
16 3811556 A G 5016.77 PASS intronic CREBBP . 16p13.3
22 41537234 G T 285.77 PASS intronic EP300 . 22q13.2
22 41543983 C G 671.77 PASS intronic EP300 . 22q13.2
non-NBBCs CHROM POS REF ALT QUAL FILTER Func Gene ExonicFunc cytoband
12 25368462 C T 161.84 PASS exonic KRAS . 12p12.1
12 25388290 G T 35.74 PASS intronic KRAS synonymous SNV 12p12.1
13 48947469 G T 112.9 PASS intronic RB1 . 13q14.2
16 3811556 A G 5016.77 PASS intronic CREBBP . 16p13.3
22 41543983 C G 671.77 PASS intronic EP300 . 22q13.2