Table 1.
Structural and coding details of chickpea JAZ genes.
JAZ name | Protein ID | Chr. | Physical position | CTDB id | Domains/motifs | CDS length | No. of exons | aa length | pI | Protein MW (Kda) | AL | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CaJAZ10 | Ca_01810.1 | Ca_LG_2 | 12,357,154 | 12,363,824 | TC11585 | TIFY, Jas | 901 | 8 | 300 | 6.73 | 32.94 | 1 |
CaJAZ3b | Ca_06739.1 | Ca_LG_6 | 3,957,625 | 3,960,995 | TC04335 | TIFY, Jas | 1021 | 7 | 346 | 8.71 | 36.421 | 3 |
CaJAZ6 | Ca_07919.1 | Ca_LG_7 | 8,049,102 | 8,052,009 | TC17994 | TIFY, Jas | 625 | 5 | 208 | 9.78 | 23.2999 | 1 |
CaJAZ1b | Ca_08149.1 | Ca_LG_8 | 3,475,024 | 3,476,860 | TC10471 | TIFY, Jas | 676 | 5 | 225 | 9.35 | 24.48 | 1 |
CaJAZ12b | Ca_08181.1 | Ca_LG_8 | 3,823,275 | 3,826,085 | TC18764 | TIFY, Jas | 541 | 5 | 180 | 9.55 | 19.606 | 1 |
CaJAZ3a | Ca_08733.1 | Ca_LG_8 | 10,385,422 | 10,391,976 | TC05885 | TIFY, Jas | 1153 | 7 | 384 | 9.29 | 41.613 | 2 |
CaJAZ3c | Ca_17203.1 | Scaffold02277 | 11,984 | 17,289 | TC11159 | TIFY, Jas | 1009 | 7 | 336 | 9.21 | 35.339 | 3 |
CaJAZ1a | Ca_18081.1 | Scaffold03027 | 3316 | 6294 | TC11369 | TIFY, Jas | 769 | 5 | 256 | 9.11 | 27.732 | 1 |
CaJAZ12a | Ca_18578.1 | Scaffold03745 | 8598 | 11,757 | TC18345 | TIFY, Jas | 625 | 5 | 208 | 8.26 | 22.247 | 2 |
CaJAZ8 | Ca_19748.1 | Scaffold06768 | 4292 | 7024 | - | TIFY, Jas | 412 | 3 | 137 | 9.1 | 15.663 | 1 |
CDS, coding sequence; aa, amino acids; MW, molecular weight; AL, alternate splicing.