Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2015 Nov 10;6:1250. doi: 10.3389/fmicb.2015.01250

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2015 Zhou, Lokate, Deurenberg, Arends, Lo-Ten Foe, Grundmann, Rossen and Friedrich.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Core-genome phylogenetic analysis of K. pneumoniae. (A) A maximum likelihood tree was constructed based on alignments of 4.4 Mb genomes which were defined as the core genomes in this study. The tree was rooted at the midpoint. The percentage of the supported bootstrap (>90) is shown. The isolates sequenced in this study are marked by dots colored red (patients involved in the outbreak), purple (environmental isolates), and blue (unrelated patients). The genomes of unmarked isolates were retrieved from GenBank. Sequence types of isolates are indicated between brackets. (B) The inset shows a close-up of the unrooted maximum likelihood phylogenetic tree of outbreak isolates based on 21 reliable SNPs as described in the text. The number of SNPs is indicated on the branches by different colors.