Table 2.
SNPs detected among outbreak isolates of patients.
| SNPs | KPOI-1/1 | KPOI-1/2 | KPOI-1/3 | KPOI-1/4 | KPOI-2 | KPOI-3 | KPOI-4 | KPOI-5 | Coding region change | Amino acid change |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | C | C | T | T | T | T | T | T | FIG00642830: hypothetical protein:262A>G | Lys88Glu |
| 2 | G | A | A | A | A | A | A | A | Outer membrane protein N precursor:948T>C | Synonymous |
| 3 | C | C | C | A | A | A | A | A | * | * |
| 4 | A | A | G | G | G | G | G | G | FIG002708: Protein SirB1:245C>T | Ser82Phe |
| 5 | A | A | G | G | G | G | G | G | DNA gyrase subunit A GyrA(EC 5.99.1.3):248C>T | Ser83Phe |
| 6 | T | T | C | C | C | C | C | C | Phosphoenolpyruvate carboxylase PPC (EC 4.1.1.31):649G>A | Val217Met |
| 7 | C | C | C | T | T | T | T | T | Rrf2 family transcriptional regulator, group III:296A>G | His99Arg |
| 8 | C | C | T | T | T | T | T | T | Rrf2 family transcriptional regulator, group III:22A>G | Thr8Ala |
| 9 | T | T | C | C | C | C | C | C | * | * |
| 10 | A | A | A | G | G | G | G | G | Sugar/maltose fermentation stimulation protein homolog:657C>T | Synonymous |
| 11 | A | A | G | G | G | G | G | G | FIG00732400: hypothetical protein:96G>A | Synonymous |
| 12 | G | G | G | A | A | A | A | A | Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2):847T>C | Tyr283His |
| 13 | C | C | T | T | T | T | T | T | Transcriptional activator RfaH:377T>C | Leu126Pro |
| 14 | G | G | T | T | T | T | T | T | hypothetical protein:84A>C | |
| 15 | G | G | G | G | G | A | G | G | 2-isopropylmalate synthase (EC 2.3.3.13):1517G>A | Gly506Asp |
| 16 | C | C | C | C | C | T | C | C | Transcriptional repressor of PutA and PutP:2624G>A | Gly875Asp |
| 17 | C | C | C | C | C | C | C | T | Putative HTH-type transcriptional regulator ybaO:416C>T | Ala139Val |
| 18 | A | A | A | T | A | A | A | A | Aldo-keto reductase:65T>A | Phe22Tyr |
| 19 | T | T | T | A | T | T | T | T | hypothetical protein:1049A>T | Asn350Ile |
SNPs are highlighted in red.
*
SNPs located in intergenic regions.