Table 1. Frequency of the rev1-vpu polymorphism in HIV-1 quasispecies of infected individuals over time.
| patient | subt. | number of TF variants | time points sequenced | total weeks studied | SGS a week 0 | SGS a week 2/3 | SGS a week 8 | SGS a week 24 | SGS a week 36 | SGS a week 48 | SGS a week 60 | SGS a week 96 | fraction SGS with rev1-vpu fusion | accession numbers | ref. |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| R880F | A | 1 | 4 | 49 | - | - | 10 | 3 | 11 | 11 | - | - | 0/35 | KP223797-809, KP223815-26, KP223834-43 | [26] |
| R463F | A | 1 | 5 | 48 | - | 14 | 8 | 8 | 8 | 9 | - | - | 0/47 | KP223729-75 | [26] |
| 705010185 | C | 1 | 5 | 60 | 27 | 11 | 27 | 15 | - | - | 16 | - | 0/96 | JX973075-170 | [27] |
| 706010164 | C | 1 | 5 | 60 | 37 | 10 | 23 | 11 | - | - | 20 | - | 101/101 | JX973234-334 | [27] |
| 705010162 | C | 1 | 5 | 60 | 14 | 17 | 7 | 9 | - | - | 23 | - | 70/70 | JX972986-98, JX973019-74, JX974246 | [27] |
| 704010042 | C | 1 | 6 | 96 | 9 | 18 | 6 | 12 | - | - | 24 | 25 | 0/94 | JX972838-930, JX974245 | [27] |
| 705010198 | C | 1 | 4 | 60 | 10 | 10 | 28 | - | - | - | 15 | - | 0/63 | JX973171-233 | [27] |
| 703010256 | C | 1 | 6 | 96 | 10 | 12 | 27 | 10 | - | - | 15 | 24 | 0/98 | JX972739-72, JX972774-837 | [27] |
a single genome sequences (SGS) per sample visit