Table 3.
Time required for the baseline all-to-all PSC task using the TMalign, CE, and USM PSC methods on the PC and a single core of the SCC. The table also shows the time required for the all-to-all MCPSC task (where all three PSC methods are used). All times are in seconds.
| Method | Ported software on PC | Ported software on SCC 1 core | ||||||
|---|---|---|---|---|---|---|---|---|
| CK34 | RS119 | CK34 | RS119 | |||||
| Load | Processing | Load | Processing | Load | Processing | Load | Processing | |
| TMalign | 0.01 | 127 | 0.05 | 1725 | 0.30 | 2514 | 1 | 33452 |
| CE | 0.80 | 374 | 3 | 6459 | 14 | 7152 | 50 | 132205 |
| USM | 0.01 | 0.60 | 0.04 | 7 | 0.70 | 30 | 2 | 345 |
| All | 0.80 | 502 | 3 | 8191 | 15 | 9697 | 53 | 166000 |