Table 3.
Genome statistics for P. yanchengensis Y32T
| Attribute | Value | % of Totala |
|---|---|---|
| Genome size (bp) | 4,281,464 | 100.00 |
| DNA coding region (bp) | 3.472,267 | 81.10 |
| DNA G + C content (bp) | 1,674,480 | 39.11 |
| Number of contigs | 153 | - |
| Contig N50 (bp) | 55350 | - |
| Total genes | 4080 | 100.00 |
| Protein-coding genes | 3965 | 97.18 |
| RNA genes | 77 | 1.89 |
| Pseudo genes | 38 | 0.93 |
| Frame shifted genes | 12 | - |
| Genes with function prediction | 2615 | 65.95 |
| Genes assigned to COGs | 2972 | 74.95 |
| Genes with Pfam domains | 3135 | 79.07 |
| Genes with signal peptides | 242 | 6.10 |
| Genes with transmembrane helices | 1176 | 29.66 |
| CRISPR repeats | 0 | - |
aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome