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. 2015 Nov 10;15:246. doi: 10.1186/s12862-015-0529-4

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© Böhm et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — SNP-based species relationship within B. cereus sensu lato. The phylogenetic tree (Maximum Likelihood Method) was calculated using the genome-wide core SNP matrix (SNPs that are present in all of the analyzed genomes) of 140 B. cereus sensu lato genomes. Phylogenetic cluster VII is too divergent for accurate detection of core SNPs using kSNP3 and had to be excluded