Table 3.
Number of sequences per group (non-redundant sequences between parenthesis) and mean identity percentage in each group for full length ORF1 and truncated sequences homologous to AVRK1 or AVRA10.
| Full length ORF1 sequences | Truncated sequences before NB domain (putative AVR/effectors) | |||
|---|---|---|---|---|
| Number of sequences | Mean identitya | Number of sequences | Mean identitya | |
| AVRK1-like | 30 (28) | 69.3 % | 135 (135) | 57.0 % |
| AVRA10-like | 32 (32) | 59.9 % | 69 (68) | 55.2 % |
| Similar to both AVRK1/AVRA10 |
61(60) | 58.3 % | 90 (90) | 49.2 % |
| Total | 123 (120) | 294 (293) | ||
aMean identity percentage in each group is based on translated full-length ORF calculated by using the pairwise identity after realigning each pair of sequences and averaging it out for all sequences in the group.