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. 2015 Oct 19;5:877–884. doi: 10.1016/j.fob.2015.10.003

Table 5.

Features calculated from mRNA folded structure.

Feature Description
mRNA_B Number of bases which are in bulge
mRNA_P Number of bases which are in paired pairs
mRNA_M Number of bases which are in multi loop
mRNA_H Number of bases which are in hairpin
mRNA_I Number of bases which are in internal loop
mRNA_E Number of bases which are in end
mRNA_max_single Maximal number of consecutive free bases
mRNA_length Length of the 3′UTR region
mRNA_A Proportion of A nucleotides in the corresponding target site of mRNA
mRNA_U Proportion of U nucleotides in the corresponding target site of mRNA
mRNA_C Proportion of C nucleotides in the corresponding target site of mRNA
mRNA_G Proportion of G nucleotides in the corresponding target site of mRNA

Adopted from Yan et al. [16].