Table 6.
Number of genes associated with general COGs functional categoriesa
| Code | Value | % | Description |
|---|---|---|---|
| J | 139 | 5.82 | Translation, ribosomal structure and biogenesis |
| A | 0 | 0 | RNA processing and modification |
| K | 83 | 3.47 | Transcription |
| L | 122 | 5.10 | Replication, recombination and repair |
| B | 0 | 0 | Chromatin structure and dynamics |
| D | 17 | 0.71 | Cell cycle control, cell division, chromosome partitioning |
| V | 43 | 1.80 | Defense mechanisms |
| T | 46 | 1.92 | Signal transduction mechanisms |
| M | 158 | 6.61 | Cell wall/membrane biogenesis |
| N | 4 | 0.17 | Cell motility |
| U | 27 | 1.13 | Intracellular trafficking and secretion |
| O | 86 | 3.60 | Posttranslational modification, protein turnover, chaperones |
| C | 106 | 4.44 | Energy production and conversion |
| G | 56 | 2.34 | Carbohydrate transport and metabolism |
| E | 148 | 6.19 | Amino acid transport and metabolism |
| F | 56 | 2.34 | Nucleotide transport and metabolism |
| H | 87 | 3.64 | Coenzyme transport and metabolism |
| I | 80 | 3.35 | Lipid transport and metabolism |
| P | 107 | 4.48 | Inorganic ion transport and metabolism |
| Q | 39 | 1.63 | Secondary metabolites biosynthesis, transport and catabolism |
| R | 211 | 8.83 | General function prediction only |
| S | 116 | 4.85 | Function unknown |
| — | 823 | 33.64 | Not in COGs |
COGs, Clusters of Orthologous Groups (COGs) database.
a
Total is based on total number of protein-coding genes in annotated genome.