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. 2015 Nov 13;81(24):8254–8264. doi: 10.1128/AEM.01883-15

TABLE 4.

Deduced functions of ORFs within the missing 12,052-bp fragment sequence

Gene Product size (no. of amino acids) Positions Homologous protein Source GenBank accession no. % amino acid identity
tnp1 264 1–795 Transposase IS6100 E. coli YP_003108355.1 100
orf7 138 835–1251 Aminoglycoside phosphotransferase Sphingobium chlorophenolicum L-1 YP_004554070.1 68
orf6 (meaB) 168 1251–1757 Hypothetical protein S. chlorophenolicum WP_013847811 31
orf5 (meaA) 392 2088–3266 Pigment production hydroxylase Rhodococcus opacus WP_012691790 39
orf1 480 3479–4921 Isopropylmalate isomerase large subunit Sphingomonas-like bacterium B12 WP_022690399 81
orf2 199 4918–5517 Isopropylmalate isomerase small subunit S. chlorophenolicum WP_013849123 61
orf3 441 5727–7052 Homogentisate 1,2-dioxygenase Sphingomonas sp. YL-JM2C WP_037520129 52
orf4 123 7073–7444 Hypothetical protein Veis_4652 Verminephrobacter eiseniae EF01-2 YP_999367.1 58
orf8 284 6625–7479 Integrase catalytic subunit S. wittichii RW1 YP_001260297.1 88
orf9 267 10253–11056 Putative transposase Magnetospirillum sp. SO-1 WP_008622716.1 84
tnp1 264 12052–11258 Transposase IS6100 E. coli YP_003108355.1 100