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. 2015 Nov 2;2015:762426. doi: 10.1155/2015/762426

Table 1.

A panel of overlapping peptides derived from HCV core and F-protein used in the tests of humoral and cellular immune response. First and last amino acid position are given according to HCV AD78 isolate genotype 1b (GenBank accession number AJ132996 [30, 36]).

Protein Amino acid positions Amino acid sequence
HCV core 1–35 MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVY
21–55 DVKFPGGGQIVGGGVYLLPRRGPRLGVRATRKTSER
41–75 GPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRT
61–95 RRQPIPKARRPEGRTWAQPGYPWPLYGNEGMGWAG
81–115 YPWPLYGNEGMGWAGWLLSPRGSRPSWGPNDPRRR
101–135 RGSRPSWGPNDPRRRSRNLGKVIDTLTCGFADLMG
121–155 KVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGV
161–195 GVNYATGNLPGCSFSILLALLSCLTTIPASAYEVR
1–18 MSTIPKPQRKTKRNTNRR
13–33 RNTNRRPQDVKFPGGGQIVGG
34–42 VYLLPRRGP
67–81 KARRPEGRTWAQPGY
129–145 GFADLMGYIPLVGAPLG
141–160 GAPLGGAARALAHGVRVLED

F-protein 30–49 SLAEFTCCRAGAPGWACARL
45–64 ACARLGRLPSGRNLVEGDNL
60–79 EGDNLSPRLAIPRAGPGLSL
75–94 PGLSLGTLGPSMAMRAWGGQ
90–109 AWGGQDGSCHPVALGLVGAP