TABLE 2.
Glycan composition of 92UG037.8 and CZA97.012 SOSIP.664-His and gp140UNC-Fd-His proteins
| HIV-1 isolate or genotype and proteinb | Glycan composition (% of total glycans)a |
|||||
|---|---|---|---|---|---|---|
| M5 | M6 | M7 | M8 | M9 | Total of M5 to M9 | |
| CZA97.012 | ||||||
| gp140UNC-Fd-His | 10 | 4 | 7 | 9 | 7 | 37 |
| SOSIP.664-His gp120 | 7 | 7 | 11 | 21 | 20 | 65 |
| SOSIP.664-His gp41 | 5 | 5 | 4 | 1 | 0 | 16 |
| 92UG037.8 | ||||||
| gp140UNC-Fd-His | 10 | 3 | 6 | 13 | 13 | 46 |
| SOSIP.664-His gp120 | 14 | 6 | 9 | 14 | 27 | 72 |
| SOSIP.664-His gp41 | 6 | 4 | 3 | 0 | 0 | 13 |
| BG505 | ||||||
| WT.SEKS gp140* | 6 | 5 | 8 | 12 | 11 | 42 |
| SOSIP.664 gp120* | 4 | 4 | 6 | 15 | 34 | 63 |
| SOSIP.664 gp41* | 6 | 9 | 12 | 5 | 2 | 34 |
The data represent the abundance (as a percentage of total glycans) of the oligomannose structures (Man5–9GlcNAc2; indicated as M5 to M9), individually and in total, for each Env protein analyzed. The remaining glycans are of the complex and hybrid type, similar to what is described in more detail elsewhere for other, similar Env proteins (39). The 92UG037.8 and CZA97.012 gp140UNC-Fd-His proteins were purified by Ni-NTA/SEC, and the values presented are for the entire gp140 protein (i.e., gp120 plus gp41ECTO), as it was not possible to separate the individual subunits. The 92UG037.8 SOSIP.664-His trimers were purified by PGT145/SEC, and the CZA97.012 SOSIP.664-His trimers were purified by PGT151/SEC. For these trimers, values are also presented for the individual gp120 and gp41ECTO subunits, which were separated for analysis on a reducing SDS-polyacrylamide gel.
For comparison, data derived from BG505 Env proteins and published elsewhere (39) are also shown (the proteins are indicated by an asterisk). WT.SEKS is an uncleaved, nonnative gp140 protein similar to gp140UNC-Fd-His but lacking the Fd and His domains (19). Both BG505 Env proteins were expressed in 293T cells and purified by 2G12/SEC.