Table 2.
S. No | Primer name | No. of alleles | Size range (bp) | PIC | S. No | Primer name | No. of alleles | Size range (bp) | PIC |
---|---|---|---|---|---|---|---|---|---|
1 | NAU-1067 | 3 | 160–156 | 0.528 | 51 | MUSS-243 | 2 | 180–176 | 0.375 |
2 | NAU-3911 | 2 | 194–190 | 0.040 | 52 | BNL-1395 | 2 | 250–245 | 0.021 |
3 | NAU-2083 | 2 | 224–220 | 0.040 | 53 | BNL-1694 | 4 | 289–272 | 0.695 |
4 | MUSS-422 | 2 | 265–260 | 0.040 | 54 | BNL-1604 | 2 | 120–115 | 0.021 |
5 | BNL-3580 | 4 | 197–190 | 0.517 | 55 | BNL-1531 | 2 | 239–235 | 0.021 |
6 | BNL-3888 | 2 | 130–126 | 0.021 | 56 | NAU-2432 | 2 | 207–204 | 0.040 |
7 | BNL-3090 | 2 | 240–234 | 0.040 | 57 | NAU-2308 | 3 | 154–146 | 0.567 |
8 | NAU-2095 | 2 | 219–215 | 0.040 | 58 | NAU-3590 | 2 | 223–220 | 0.021 |
9 | BNL-3424 | 2 | 197–192 | 0.040 | 59 | NAU-3793 | 3 | 262–255 | 0.574 |
10 | MUSS-73 | 2 | 208–205 | 0.041 | 60 | BNL-3792 | 2 | 243–240 | 0.021 |
11 | MUSS-599 | 2 | 230–227 | 0.021 | 61 | BNL-3257 | 2 | 130–127 | 0.021 |
12 | NAU-5383 | 4 | 162–110 | 0.666 | 62 | BNL-1017 | 2 | 205–202 | 0.040 |
13 | BNL-3971 | 2 | 200–196 | 0.021 | 63 | NAU-2407 | 2 | 105–102 | 0.021 |
14 | BNL-1897 | 2 | 190–186 | 0.040 | 64 | NAU-920 | 2 | 155–150 | 0.021 |
15 | BNL-1434 | 3 | 148–137 | 0.554 | 65 | MUSS-189 | 2 | 216–210 | 0.021 |
16 | NAU-5499 | 3 | 145–154 | 0.581 | 66 | BNL-686 | 3 | 210–202 | 0.581 |
17 | BNL-3259 | 2 | 105–102 | 0.021 | 67 | BNL-1162 | 2 | 134–130 | 0.021 |
18 | MUSS-207 | 2 | 224–220 | 0.021 | 68 | BNL-1672 | 2 | 180–177 | 0.021 |
19 | MUSS-192 | 2 | 220–217 | 0.040 | 69 | NAU-2322 | 2 | 240–236 | 0.040 |
20 | MUSS-172 | 2 | 219–215 | 0.021 | 70 | NAU-3052 | 2 | 190–185 | 0.021 |
21 | NAU-1070 | 2 | 250–245 | 0.021 | 71 | NAU-1009 | 2 | 125–122 | 0.021 |
22 | BNL-226 | 2 | 244–240 | 0.021 | 72 | NAU-1046 | 2 | 200–197 | 0.021 |
23 | NAU-1190 | 2 | 190–185 | 0.021 | 73 | BNL-4053 | 2 | 220–215 | 0.021 |
24 | BNL-3441 | 2 | 180–175 | 0.021 | 74 | NAU-3467 | 2 | 224–220 | 0.021 |
25 | BNL-2443 | 2 | 196–190 | 0.021 | 75 | MUSS-68 | 2 | 205–203 | 0.021 |
26 | NAU-1167 | 2 | 190–186 | 0.021 | 76 | NAU-3454 | 2 | 234–230 | 0.021 |
27 | NAU-3083 | 2 | 145–140 | 0.021 | 77 | BNL-2530 | 2 | 180–176 | 0.021 |
28 | NAU-2363 | 3 | 192–180 | 0.593 | 78 | BNL-256 | 2 | 230–226 | 0.040 |
29 | BNL-4047 | 3 | 183–177 | 0.557 | 79 | BNL-2631 | 2 | 219–215 | 0.021 |
30 | BNL-530 | 2 | 120–116 | 0.040 | 80 | BNL-3895 | 2 | 240–236 | 0.372 |
31 | NAU-3093 | 2 | 170–167 | 0.021 | 81 | NAU-1182 | 2 | 206–200 | 0.021 |
32 | BNL-4049 | 4 | 143–127 | 0.692 | 82 | MUSS-123 | 2 | 200–195 | 0.021 |
33 | BNL-2572 | 4 | 207–170 | 0.586 | 83 | BNL-1231 | 2 | 191–188 | 0.021 |
34 | NAU-2865 | 2 | 204–200 | 0.040 | 84 | BNL-1066 | 4 | 206–198 | 0.593 |
35 | NAU-2000 | 4 | 195–180 | 0.700 | 85 | NAU-1162 | 2 | 235–229 | 0.021 |
36 | MUSS-99 | 3 | 320–310 | 0.577 | 86 | BNL-1404 | 2 | 225–219 | 0.021 |
37 | BNL-3995 | 2 | 174–170 | 0.021 | 87 | BNL-3147 | 2 | 107–104 | 0.021 |
38 | BNL-3992 | 3 | 205–196 | 0.570 | 88 | NAU-3377 | 2 | 237–234 | 0.021 |
39 | BNL-542 | 3 | 204–195 | 0.590 | 89 | MUSS-26 | 2 | 200–196 | 0.021 |
40 | BNL-3241 | 6 | 230–170 | 0.800 | 90 | NAU-3426 | 4 | 260–220 | 0.700 |
41 | NAU-934 | 3 | 152–147 | 0.589 | 91 | NAU-4047 | 2 | 190–186 | 0.021 |
42 | BNL-3359 | 2 | 205–202 | 0.021 | 92 | BNL-3261 | 2 | 149–146 | 0.021 |
43 | BNL-2569 | 2 | 175–170 | 0.021 | 93 | NAU-1278 | 2 | 215–209 | 0.021 |
44 | BNL-1440 | 2 | 201–197 | 0.021 | 94 | BNL-1673 | 2 | 234–229 | 0.021 |
45 | NAU-1151 | 4 | 233–220 | 0.659 | 95 | BNL-1679 | 2 | 211–208 | 0.021 |
46 | NAU-2580 | 2 | 205–202 | 0.040 | 96 | NAU-2038 | 3 | 210–200 | 0.500 |
47 | NAU-3206 | 3 | 247–240 | 0.564 | 97 | NAU-1141 | 2 | 156–150 | 0.021 |
48 | NAU-3427 | 3 | 197–190 | 0.579 | 98 | BNL-2652 | 2 | 175–170 | 0.021 |
49 | NAU-933 | 3 | 173–165 | 0.554 | 99 | BNL-4029 | 2 | 220–217 | 0.021 |
50 | NAU-4030 | 2 | 159–155 | 0.021 | 100 | BNL-1707 | 4 | 180–140 | 0.702 |
The bold names are the SSR primers which exhibited PIC value greater than or equal to 0.5