Table 1.
Genome sequence summary statistics for each Venturia isolate included in this analysis.
Venturia inaequalis | V. pirina | ||||
---|---|---|---|---|---|
Race | 1 | 1,10 | 5 | Unknown | Unknown |
Name | Vi1 (MNH120) | B04 | R5 | 1389 | 11032 |
Host | Malus × domestica | Malus × domestica | Malus × domestica | Eriobotrya japonica | Pyrus communis |
Estimated genome coverage | 120x | 90x | 55x | 89x | 74x |
Number of scaffolds | 1,012 | 1,415 | 1,308 | 1,040 | 364 |
Size (Mb) | 55 | 61 | 72 | 62 | 41 |
Scaffold N50 | 233,760 | 136,376 | 263622 | 213,378 | 332,167 |
Number of contigs | 3,520 | 3,716 | 1,689 | 2,557 | 1,561 |
Contig N50 | 65,081 | 84,371 | 92,135 | 121,114 | 146,156 |
BUSCO completeness (% of complete single copy orthologues identified from a reference set) | 96.5% | 97% | 96% | 97% | 97% |
Percentage of genome covered by repetitive elements | 4.11% | 33.41% | Not determined | 35.60% | 7.28% |