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. 2015 Nov 14;16:940. doi: 10.1186/s12864-015-2181-1

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© Sempéré et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Proportion of assigned individuals and misassignment rate in assignment tests based on supervised clustering. The 2250 individuals from 45 public populations of the world reference dataset were assigned against the world reference dataset, using 32,966 (33K) SNP, 10K SNP and 1K SNP, with different values for the EM algorithm’s ε stopping criterion (0.01, 0.1 and 1). The proportion of assigned individuals a and the misassignment rate b were plotted against ancestry thresholds (0–1)