Table 2. Subcellular location of the sepecific ABCB gene category.
Species | Category | Gene ID | Descriptiona | De novo predictionb | GO annotationc |
---|---|---|---|---|---|
Arabidopsis thaliana | Viridiplantae | NP_200635.1 | ABC transporter of the mitochondrion 3, sta1 gene | mitochondrion | mitochondrion* (Rocio et al. 2001) |
Arabidopsis thaliana | Viridiplantae | NP_194591.1 | ABC transporter B family member 24, mitochondrial, AtATM2 gene | mitochondrion | mitochondrion* (Rocio et al. 2001) |
Arabidopsis thaliana | Viridiplantae | NP_567813.1 | ABC transporter B family member 23, mitochondrial, AtATM1 gene | mitochondrion | mitochondrion* (Rocio et al. 2001) |
Arabidopsis thaliana | Viridiplantae | NP_196011.1 | ABC transporter B family member 29, chloroplastic | chloroplast | chloroplast |
Caenorhabditis elegans | Metazoa | NP_001022812.1 | heavy metal tolerance factor 1,Hmt1 | / | mitochondrion |
Caenorhabditis elegans | Metazoa | NP_001021830.1 | ABC7 protein | mitochondrion | mitochondrion |
Danio rerio | Metazoa | XP_005160347.1 | ATP-binding cassette sub-family B member 6, mitochondrial isoform X1 | endoplasmic reticulum | mitochondrion |
Danio rerio | Metazoa | XP_005167575.1 | ATP-binding cassette sub-family B member 6, mitochondrial | / | mitochondrion |
Danio rerio | Metazoa | XP_694879.2 | ATP-binding cassette sub-family B member 7, mitochondrial | mitochondrion | mitochondrion |
Dictyostelium discoideum AX4 | Amoebozoa | XP_629496.1 | Similar to ATP-binding cassette sub-family B member 7, mitochondrial-like [Oryzias latipes] | mitochondrion | mitochondrion |
Dictyostelium discoideum AX4 | Amoebozoa | XP_639260.1 | Similar to metal ABC transporter permease [Achromobacter xylosoxidans] | / | / |
Drosophila melanogaster | Metazoa | NP_650503.1 | heavy metal tolerance factor 1,Hmt1 | / | mitochondrion |
Drosophila melanogaster | Metazoa | NP_728642.2 | ABCB7 | mitochondrion | / |
Giardia lamblia ATCC 50803 | Fornicata | XP_001710177.1 | Multidrug resistance ABC transporter | / | / |
Homo sapiens | Metazoa | NP_005680.1 | ATP-binding cassette sub-family B member 6, mitochondrial | / | mitochondrion* (Mitsuhashi et al. 2000) |
Homo sapiens | Metazoa | NP_004290.2 | ATP-binding cassette sub-family B member 7 | mitochondrion | mitochondrion* (Csere et al. 1998) |
Leishmania major strain Friedlin | Euglenozoa | XP_001685635.1 | Similar to mitochondrial ABC transporter ATM [Angomonas deanei] | mitochondrion | mitochondrion |
Monosiga brevicollis MX1 | Choanoflagellida | XP_001745205.1 | Similar to ATP-binding cassette sub-family B member 7, mitochondrial-like [Hydra vulgaris ] | mitochondrion | mitochondrion |
Monosiga brevicollis MX1 | Choanoflagellida | XP_001749749.1 | Similar to heavy metal tolerance protein precursor [Brucella sp. BO2] | / | mitochondrion |
Monosiga brevicollis MX1 | Choanoflagellida | XP_001749388.1 | Similar to ATP-binding cassette sub-family B member 10, mitochondrial isoform 3 [Dasypus novemcinctus] | endoplasmic reticulum | mitochondrion |
Mus musculus | Metazoa | NP_076221.1 | ATP-binding cassette sub-family B member 6, mitochondrial | / | mitochondrion* (Krishnamurthy et al. 2006) |
Mus musculus | Metazoa | NP_033722.1 | ATP-binding cassette sub-family B member 7, mitochondrial | mitochondrion | mitochondrion* (Sakaino et al. 2009) |
Plasmodium falciparum 3D7 | Alveolata | XP_001350233.1 | heavy metal transporter family | mitochondrion | / |
Plasmodium falciparum 3D7 | Alveolata | XP_001348629.1 | heavy metal transport family | / | vacuolar membrane |
Saccharomyces cerevisiae S288c | Fungi | NP_014030.1 | ATP-binding cassette Fe/S cluster precursor transporter ATM1 | mitochondrion | mitochondrion* (Kispal et al. 1999) |
Schizosaccharomyces pombe | Fungi | NP_588371.3 | vacuolar heavy metal tolerance protein, Hmt1 | endoplasmic reticulum | fungal-type vacuole membrane |
Schizosaccharomyces pombe | Fungi | NP_594288.2 | mitochondrial ABC family iron transporter Atm1 | mitochondrion | mitochondrion |
Tetrahymena thermophila SB210 | Alveolata | XP_001030428.1 | ABC transporter family protein | mitochondrion | mitochondrion |
Trypanosoma brucei | Euglenozoa | XP_829749.1 | Similar to mitochondrial ABC transporter ATM [Angomonas deanei] | mitochondrion | mitochondrion |
Trypanosoma brucei | Euglenozoa | XP_829749.1 | Similar to mitochondrial ABC transporter ATM [Angomonas deanei] | mitochondrion | mitochondrion |
aSequence description by BLASTP similarity searches.
bSubcellular localization prediction by TargetP, Predotar or WoLF PSORT.
cGene ontology cellular component annotations by Goanna (http://agbase.msstate.edu/cgi-bin/tools/GOanna.cgi).
*Localization supported by reference (experimental data).