Table 1.
miRNA Triggers of PHAS Genes or Loci Identified in Spruce.
| miRNA | Sequence | Length | Target PHAS Genes/Loci |
|---|---|---|---|
| miR393 | UCCAAAGGGAUUGCAUUGAUUC | 22 | Transport inhibitor response 1/ auxin-binding F-box gene (TIR1/AFB) |
| miR4376 | UGCGCAGGGGAGAUGACACUGU | 22 | Autoinhibited Ca(2+)-ATPase 10 (ACA10) |
| miR2111 | UAAUCUGCAUCCUGGGGUUUG | 21 | Galactose oxidase/kelch repeat superfamily |
| miR3699 | UGACAGAAGAUAGACUUUGGUC | 22 | Integrase-type DNA-binding superfamily protein |
| miR11425 | UUUCACAGCUAUAUCUUUUCCU | 22 | Leucine-rich repeat protein kinase family |
| miR11551 | UGUUUUGUUUUCCCUCCGCAAU | 22 | Leucine-rich repeat protein kinase family |
| miR11540 | UGCCGAAGCCUGGAGGAAUAUC | 22 | Leucine-rich repeat protein kinase family |
| miR11562 | UUCUGAUAAUGCUUCACCCUCA | 22 | MTTF family protein |
| miR828 | UCUUGCUCAAAUGAGUGUUCCA | 22 | MYB |
| miR482/miR2118 | UCUUUCCACUUCUACCCAUUUC | 22 | NB-LRR/noncoding |
| miR482_2 | UUGAGAAACUGUGAGCCAAAUC | 22 | NB-LRR |
| miR951 | UGUUCUUGACGUCUGGACCACG | 22 | NB-LRR/noncoding |
| miR946 | CAGCCCUUCUGCUAUCCACAAC | 22 | NB-LRR |
| miR950 | UCUGGGCCCCGGUGGUUUAUGA | 22 | NB-LRR |
| miR1311 | UCAGAGUUUUGCCAGUUCCGCC | 22 | NB-LRR |
| miR1312 | UUCGGAGAGAAAAUGGCGACAU | 22 | NB-LRR |
| miR3697 | UAGCCCCUGACUUCAACAUGAG | 22 | NB-LRR |
| miR3701 | UAAACAGUGCCCACCCUUCAUC | 22 | NB-LRR |
| miR3701_2 | UGGCAAUAGCCUCUAUGUUCUU | 22 | NB-LRR |
| miR3709 | UUCAGAUGCUUUAAAUUCCCGA | 22 | NB-LRR |
| miR3710 | UUGGGAACCUGACGGGUCUCC | 21 | NB-LRR |
| miR11476 | UAAGCAGCCCUUCUCCGAUCCA | 22 | NB-LRR |
| miR11482 | UAACCAGUCCUUCUGCAAUCCA | 22 | NB-LRR |
| miR11506 | UCACAAAACACCGGAAUAAUCU | 22 | NB-LRR |
| miR11511 | UCCAACGAAGAUCAGAAGGCUU | 22 | NB-LRR |
| miR11519 | UCGUAAAACACAGGAAUGAUGG | 22 | NB-LRR |
| miR11523 | UCUCAGCAGAUUUAAUCCCCGA | 22 | NB-LRR |
| miR11528 | UCUGGCAACAUCCUCUAUUUCA | 22 | NB-LRR |
| miR11532 | UGACAUUGUAAAAGACGGGAAU | 22 | NB-LRR |
| miR11546 | UGGUACGGGUUGAAGUAGCACC | 22 | NB-LRR |
| miR947 | UAUCGGAAUCUGUUACUGUUUC | 22 | Unknown/noncoding |
| miR3698 | UAAGCCAAGGCAGAGUUGCAAG | 22 | Unknown |
| miR11462 | UCUGCCAGAGUGUGGCCGCGGA | 22 | Unknown |
| miR3627 | UGGCGCAGAAGAAAUGACACUG | 22 | Unknown |
| miR11570 | UUGCUUGAGUAACUUGAACACA | 22 | Unknown |
| miR11452 | UGGGAGCGAUCGAUGAGGUGUU | 22 | Unknown |
| miR390 | AAGCUCAGGAGGGAUAGCGCC | 21 | TAS3 |
| miR949 | UCCCGGGAAUCCAAUGGGCCUU | 22 | Noncoding |
| miR1313 | UACCACUGAAAUUAUUGUUCGA | 22 | Noncoding |
| miR1314 | UCGGCCUCGAAUGUUAGGAGAA | 22 | Noncoding |
| miR11529 | UCUUAUCUUUGAAAGUGCUAGC | 22 | Noncoding |
| miR11535 | UGAGCCGCUUUUGGAUGUGACG | 22 | Noncoding |
| miR11550 | UGUGGCGAACAAGUAACUCAUU | 22 | Noncoding |