Table 2. Result of the Trinity transcripts assembly.
| Sample name | F1 | F2 | F3 | S1 | S2 | S3 |
|---|---|---|---|---|---|---|
| Raw reads | 53728010 | 60492160 | 59526022 | 51987136 | 74599184 | 70375224 |
| Clean reads | 52205350 | 58855834 | 57841646 | 50585486 | 72116290 | 68417302 |
| Number of contigs | 36499 | 37287 | 37645 | 36953 | 38528 | 39647 |
| Number of characters | 49304573 | 50626218 | 51400958 | 48397183 | 53368664 | 51946657 |
| Average contig length (bp) | 1350.85 | 1357.74 | 1365.41 | 1309.70 | 1385.19 | 1310.23 |
| Median contig length (bp) | 770 | 782 | 779 | 737 | 790 | 734 |
| Contig N50 length (bp) | 2493 | 2498 | 2515 | 2394 | 2544 | 2414 |
| Reads mapping to all unigenes (%) | 99.30 | 99.13 | 99.44 | 99.37 | 99.59 | 99.28 |