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. 2015 Nov 18;10(11):e0142434. doi: 10.1371/journal.pone.0142434

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© 2015 Yang, Zhu

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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Fig 12 — Amino acid sequences were aligned by the ClustalW 2.0, and phylogenetic relationships were reconstructed using a maximum-likelihood (ML) method in PHYML software with JTT amino acid substitution model. Previously published plant MADS-box protein sequences were retrieved from GenBank database (PeMADS2: AAR26628, CeAP3-like1: AFH66788, CeAP3-like2: AFH66787, CgAP3:ADI58460, CeMADS2: ADP00516, CeMADS1: ADP00515, CePI-like: AFH66786, OMADS11: ADJ6724, OMADS6: ADJ67238, OMADS1: ADJ67237, OMADS10: ADJ67240, OMADS2: AIJ29175, OMADS3: AAO45824, OMADS4: AIJ29176, DthyrAG1: AAY86364, DthyrAG2: AAY86365, PhalAG1: BAE80120, PhalAG2: BAE80121, PeMADS2: AY378149, PeMADS3: AY378150, PeMADS4: AY378151, PeMADS5: AY378148).