Table 5. Summary of DGE sequencing quality and alignment.
Sepal | Petal | Labellum | Gynostemium | |
---|---|---|---|---|
Total reads | 31,063,650(100%) | 31,237,880(100%) | 29,464,502(100%) | 26,291,414(100%) |
Total mapped | 28,314,897(91.15%) | 28,885,091(92.47%) | 26,626,616(90.35%) | 20,985,335(79.82%) |
Multiple mapped | 3,882,139(12.50%) | 3,057,936(9.79%) | 3,595,240(12.20%) | 5,328,168(20.27%) |
Uniquely mapped | 24,432,758(78.65%) | 25,827,155(82.68%) | 23,031,376(78.15%) | 15,657,167(59.55%) |
Read1 mapped | 14,166,443(45.60%) | 14,454,262(46.27%) | 13,321,458(45.20%) | 10,499,498(39.94%) |
Read2 mapped | 14,148,454(45.55%) | 14,430,829(46.20%) | 13,305,158(45.15%) | 10,485,837(39.88%) |
Reads map to’+’ | 14,170,934(45.62%) | 14,437,837(46.22%) | 13,337,405(45.26%) | 10,524,193(40.03%) |
Reads map to’- | 14,143,963(45.53%) | 14,447,254(46.25%) | 13,289,211(45.09%) | 10,461,142(39.79%) |
Duplication | 12,403,029(39.93%) | 15,231,879(48.76%) | 11,439,220(38.82%) | 2,605,567(9.91%) |