Table 1.
GO term | Ontologya | Description | Number in input list | Number in rice genome | p value | FDR |
---|---|---|---|---|---|---|
GO:0003824 | F | Catalytic activity | 71 | 13508 | 5.80E − 04 | 1.50E − 02 |
GO:0005737 | C | Cytoplasm | 87 | 11866 | 2.70E − 13 | 3.80E − 11 |
GO:0044424 | C | Intracellular part | 94 | 14514 | 2.00E − 11 | 1.40E − 09 |
GO:0044444 | C | Cytoplasmic part | 79 | 10930 | 4.00E − 11 | 1.90E − 09 |
GO:0005622 | C | Intracellular | 94 | 15144 | 3.20E − 10 | 1.10E − 08 |
GO:0005739 | C | Mitochondrion | 22 | 1611 | 2.70E − 07 | 7.60E − 06 |
GO:0044464 | C | Cell part | 103 | 19532 | 3.30E − 07 | 7.80E − 06 |
GO:0043229 | C | Intracellular organelle | 74 | 12251 | 1.60E − 06 | 2.80E − 05 |
GO:0043226 | C | Organelle | 74 | 12251 | 1.60E − 06 | 2.80E − 05 |
GO:0005623 | C | Cell | 109 | 22048 | 3.10E − 06 | 4.80E − 05 |
GO:0043227 | C | Membrane-bounded organelle | 71 | 11878 | 5.30E − 06 | 6.70E − 05 |
GO:0043231 | C | Intracellular membrane-bounded organelle | 71 | 11878 | 5.30E − 06 | 6.70E − 05 |
GO:0009536 | C | Plastid | 35 | 4703 | 7.70E − 05 | 9.00E − 04 |
GO:0005829 | C | Cytosol | 27 | 3345 | 1.70E − 04 | 1.90E − 03 |
GO:0005618 | C | Cell wall | 14 | 1179 | 2.00E − 04 | 2.00E − 03 |
GO:0030312 | C | External encapsulating structure | 14 | 1189 | 2.20E − 04 | 2.10E − 03 |
GO:0005773 | C | Vacuole | 17 | 1723 | 3.70E − 04 | 3.20E − 03 |
GO:0043232 | C | Intracellular non-membrane-bounded organelle | 13 | 1237 | 1.10E − 03 | 8.30E − 03 |
GO:0043228 | C | Non-membrane-bounded organelle | 13 | 1237 | 1.10E − 03 | 8.30E − 03 |
GO:0005730 | C | Nucleolus | 7 | 495 | 3.30E − 03 | 0.024 |
aP: biological process; C: cellular component; F: molecular function.