Figure 5.

Effect of Uncertainty in Tree Topology on Divergence Time Estimates of the Metazoa

Four nodes (A–D) can be rearranged in three different ways (1–3), and a fifth node (E) can be rearranged in two ways, resulting in a total of 162 tree topologies reflecting the uncertain relationships around these five nodes. Divergence times were estimated using strategy 1, the IR model, and a single partition using each tree (bottom panel). Some phylogenetic hypothesis had a strong effect on posterior mean times; for example, placing the Placozoa as the most basal with respect to Cnidaria and Bilateria (A) leads to substantially older divergence times for the Metazoa (bottom panel), whereas placing Cnidaria as the most basal leads to substantially older times for the divergence of Eumetazoa.