Table 1. Cross-comparison of sensitivity at similar specificity and vice versa for simulated data sets of 75/100/250 bp.
| Simulated data | Bat-Align | Bowtie2 | BWA-SW | SeqAlto | BWA-short | BWA-MEM | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SEN | ACC | SEN | ACC | SEN | ACC | SEN | ACC | SEN | ACC | SEN | ACC | |
| 75 bp | 91.0 | 99.998 | 84.1 | 99.987 | 74.9 | 97.168 | 85.5 | 99.862 | 82.2 | 99.944 | 89.5 | 99.998 |
| 100 bp | 91.1 | 100.0 | 83.7 | 99.992 | 75.8 | 96.644 | 87.7 | 99.786 | 47.8 | - | 90.2 | 99.999 |
| 250 bp | 88.8 | 99.999 | 85.1 | 99.891 | 86.1 | 99.996 | 88.2 | 99.999 | 88.5 | 100.0 | 87.1 | 99.998 |
SEN is sensitivity.
ACC is specificity.
Best performance pertaining to each read-length are in BOLD.